Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 6.0e-58 227.3 111 100.0
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 3.1e-30 135.2 89 76.4
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.0e-25 120.2 89 65.2
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.8e-25 119.4 85 69.4
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 5.6e-24 114.4 91 62.6
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 7.4e-24 114.0 89 65.2
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 1.6e-23 112.8 92 62.0
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 2.1e-23 112.5 92 60.9
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 3.7e-23 111.7 89 62.9
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 4.8e-23 111.3 92 59.8
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 6.2e-23 110.9 105 56.2
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 8.2e-23 110.5 89 61.8
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 8.2e-23 110.5 89 61.8
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 8.2e-23 110.5 92 59.8
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.8e-22 109.4 92 60.9
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 1.8e-22 109.4 93 58.1
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 1.8e-22 109.4 109 52.3
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 9.0e-22 107.1 96 57.3
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 9.0e-22 107.1 90 61.1
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.2e-21 106.7 92 57.6
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 1.2e-21 106.7 92 60.9
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 1.2e-21 106.7 92 60.9
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 1.5e-21 106.3 94 60.6
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.5e-21 106.3 109 53.2
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 1.5e-21 106.3 94 56.4
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 1.5e-21 106.3 96 58.3
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 2.0e-21 105.9 89 57.3
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 2.0e-21 105.9 92 57.6
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 2.0e-21 105.9 87 63.2
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 2.0e-21 105.9 90 57.8
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 2.0e-21 105.9 83 63.9
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.6e-21 105.5 89 59.6
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 2.6e-21 105.5 92 57.6
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 3.4e-21 105.1 92 57.6
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 3.4e-21 105.1 84 63.1
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 3.4e-21 105.1 89 60.7
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 4.5e-21 104.8 94 54.3
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 5.8e-21 104.4 92 58.7
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 5.8e-21 104.4 94 57.4
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 7.6e-21 104.0 104 56.7
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 7.6e-21 104.0 104 56.7
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 7.6e-21 104.0 95 60.0
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 1.3e-20 103.2 92 56.5
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 1.7e-20 102.8 92 55.4
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 2.9e-20 102.1 93 57.0
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 2.9e-20 102.1 92 56.5
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 3.8e-20 101.7 92 53.3
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 6.5e-20 100.9 91 54.9
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 6.5e-20 100.9 95 56.8
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 8.4e-20 100.5 92 56.5
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 1.4e-19 99.8 94 51.1
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 1.4e-19 99.8 92 52.2
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.4e-19 99.8 103 51.5
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 1.4e-19 99.8 95 53.7
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 1.9e-19 99.4 92 54.3
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 1.9e-19 99.4 94 55.3
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 2.5e-19 99.0 94 53.2
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 2.5e-19 99.0 69 69.6
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 2.5e-19 99.0 92 51.1
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 2.5e-19 99.0 90 56.7
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 3.2e-19 98.6 94 52.1
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 3.2e-19 98.6 104 52.9
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 3.2e-19 98.6 90 55.6
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 3.2e-19 98.6 92 54.3
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 4.2e-19 98.2 92 54.3
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 4.2e-19 98.2 89 53.9
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 5.5e-19 97.8 94 51.1
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 9.3e-19 97.1 92 54.3
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 9.3e-19 97.1 94 53.2
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 9.3e-19 97.1 110 46.4
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.2e-18 96.7 90 53.3
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 1.6e-18 96.3 90 54.4
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 2.1e-18 95.9 94 51.1
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 2.1e-18 95.9 94 52.1
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 2.7e-18 95.5 94 52.1
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 2.7e-18 95.5 94 52.1
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 2.7e-18 95.5 94 52.1
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 2.7e-18 95.5 104 53.8
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 3.5e-18 95.1 104 50.0
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 3.5e-18 95.1 90 53.3
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 3.5e-18 95.1 90 53.3
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 3.5e-18 95.1 90 53.3
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 4.6e-18 94.7 92 51.1
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 6.0e-18 94.4 94 52.1
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 6.0e-18 94.4 92 52.2
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 7.9e-18 94.0 93 51.6
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.3e-17 93.2 90 54.4
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 1.8e-17 92.8 90 53.3
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 1.8e-17 92.8 92 50.0
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 3.0e-17 92.0 101 51.5
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 3.9e-17 91.7 80 53.8
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 6.7e-17 90.9 92 52.2
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 5.7e-16 87.8 95 49.5
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 9.7e-16 87.0 73 60.3
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.3e-15 86.7 67 61.2
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 2.2e-15 85.9 68 64.7
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 1.2e-13 80.1 54 70.4
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 1.4e-11 73.2 55 63.6
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 2.5e-11 72.4 50 64.0
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 2.1e-10 69.3 104 40.4
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 3.6e-10 68.6 52 55.8
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 7.9e-10 67.4 48 68.8


User provided reference genes

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