Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28379 Nelumbo nucifera HOM05D016285 ORTHO05D020558 1.9e-133 479.2 240 100.0
Nn2g14987 Nelumbo nucifera HOM05D016285 ORTHO05D020558 2.3e-131 472.2 240 99.2
Nn5g28380 Nelumbo nucifera HOM05D016285 ORTHO05D020558 7.4e-130 467.2 240 98.3
Nn5g28388 Nelumbo nucifera HOM05D016285 ORTHO05D020558 5.8e-66 255.0 130 98.5
TAR625G0022 Trochodendron aralioides HOM05D000307 ORTHO05D000166 7.2e-16 88.6 240 30.4
Dinv11991 Davidia involucrata HOM05D016285 ORTHO05D020558 2.1e-15 87.0 132 37.1
TAR625G0923 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.3e-14 83.6 195 31.8
Dinv15101 Davidia involucrata HOM05D000307 ORTHO05D000166 5.1e-14 82.4 241 28.2
MBI10_g35440_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 5.1e-14 82.4 143 37.1
TAR625G0700 Trochodendron aralioides HOM05D000307 ORTHO05D000166 5.1e-14 82.4 201 31.3
MBI09_g18620_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 1.5e-13 80.9 135 36.3
Aqoxy5G00368 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 4.4e-13 79.3 171 32.2
MBI10_g26051_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 7.4e-13 78.6 144 35.4
TAR362G1158 Trochodendron aralioides HOM05D000307 ORTHO05D000166 7.4e-13 78.6 187 31.0
TAR362G0722 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.8e-12 76.6 187 31.0
MBI07_g09577_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 4.8e-12 75.9 165 30.3
TAR362G1166 Trochodendron aralioides HOM05D000307 ORTHO05D000166 6.3e-12 75.5 187 30.5
TAR362G0056 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.1e-11 74.7 187 29.9
MBI10_g35437_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 1.4e-11 74.3 94 41.5
Nn3g20237 Nelumbo nucifera HOM05D016285 ORTHO05D020558 2.4e-11 73.6 78 57.7
Hma1.2p1_0038F.1_g024040 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 4.1e-11 72.8 190 30.0
MBI10_g26049_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 4.1e-11 72.8 126 35.7
MBI10_g35438_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 4.1e-11 72.8 145 32.4
Phvul.002G183400 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 5.3e-11 72.4 143 32.2
Aqoxy7G02773 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 6.9e-11 72.0 142 31.0
Nn1g01987 Nelumbo nucifera HOM05D000307 ORTHO05D000166 6.9e-11 72.0 148 31.1
TAR625G1049 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.2e-10 71.2 135 33.3
TAR625G0088 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.5e-10 70.9 135 33.3
TAR625G0813 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.5e-10 70.9 135 33.3
Dinv38751 Davidia involucrata HOM05D016285 ORTHO05D020558 2.0e-10 70.5 82 45.1
CSS0029060 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.6e-10 70.1 147 33.3
QL06p031925 Quercus lobata HOM05D000307 ORTHO05D000166 2.6e-10 70.1 132 33.3
CSS0036324 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.9e-10 68.9 143 33.6
VMungo0251G0242 Vigna mungo HOM05D008089 ORTHO05D000166 5.9e-10 68.9 124 33.1
VMungo0647G1946 Vigna mungo HOM05D008089 ORTHO05D000166 5.9e-10 68.9 124 33.1
Nn3g20912 Nelumbo nucifera HOM05D016285 ORTHO05D000166 7.7e-10 68.6 147 32.0
CSS0022233 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.0e-09 68.2 143 33.6
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 1.0e-09 68.2 187 28.3
MBI10_g35436_MAGBIO Magnolia biondii HOM05D002111 ORTHO05D002160 1.3e-09 67.8 124 35.5
Nn4g24661 Nelumbo nucifera HOM05D000307 ORTHO05D000166 1.3e-09 67.8 148 32.4
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 1.3e-09 67.8 157 28.7
Oeu023403.1 Olea europaea HOM05D000307 ORTHO05D000166 1.7e-09 67.4 197 31.0
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 2.2e-09 67.0 140 31.4
TAR362G0043 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.2e-09 67.0 137 35.0
Duzib264G0859 Durio zibethinus HOM05D000307 ORTHO05D000166 2.9e-09 66.6 133 32.3
TAR362G0570 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.9e-09 66.6 135 33.3
TAR362G1006 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.9e-09 66.6 135 33.3
CSS0009687 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 3.8e-09 66.2 131 34.4
Prupe.3G148900 Prunus persica HOM05D000307 ORTHO05D000166 5.0e-09 65.9 149 31.5
Aqoxy5G00359 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 6.5e-09 65.5 144 29.2
CSS0020770 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.5e-09 65.5 142 32.4
Haze_14188 Corylus avellana HOM05D000307 ORTHO05D000166 6.5e-09 65.5 213 30.0
TAR624G0600 Trochodendron aralioides HOM05D000307 ORTHO05D000166 6.5e-09 65.5 174 28.7
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 8.5e-09 65.1 134 32.8
TWI34G1561 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 8.5e-09 65.1 184 30.4
Aqoxy3G01774 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 1.1e-08 64.7 201 26.9
CSS0029498 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.1e-08 64.7 139 32.4
Oeu046899.1 Olea europaea HOM05D000307 ORTHO05D000166 1.4e-08 64.3 142 30.3
Oeu061767.1 Olea europaea HOM05D000307 ORTHO05D000166 1.4e-08 64.3 142 29.6
Actinidia09597 Actinidia chinensis HOM05D002537 ORTHO05D002751 1.9e-08 63.9 133 31.6
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 1.9e-08 63.9 134 32.1
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.9e-08 63.9 134 32.1
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.9e-08 63.9 134 32.1
Cpa.g.sc0.43 Carica papaya HOM05D000307 ORTHO05D000166 2.5e-08 63.5 150 30.7
CiPaw.03G065100 Carya illinoinensis HOM05D000307 ORTHO05D000166 2.5e-08 63.5 132 34.1
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.5e-08 63.5 124 33.9
Oeu061769.1 Olea europaea HOM05D000307 ORTHO05D000166 2.5e-08 63.5 142 28.9
Glyma.05G140000 Glycine max HOM05D000307 ORTHO05D000166 3.2e-08 63.2 167 28.7
RcHm_v2.0_Chr6g0296351 Rosa chinensis HOM05D000307 ORTHO05D000166 3.2e-08 63.2 134 30.6
CSS0047056 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.5e-08 62.4 150 30.7
Cfa007888 Carpinus fangiana HOM05D000307 ORTHO05D000166 5.5e-08 62.4 207 27.5
Prupe.2G110900 Prunus persica HOM05D000307 ORTHO05D000166 5.5e-08 62.4 250 27.2
Gohir.A11G177200 Gossypium hirsutum HOM05D000307 ORTHO05D000166 7.2e-08 62.0 249 27.3
Lsat_1_v5_gn_5_103840 Lactuca sativa HOM05D000307 ORTHO05D000166 7.2e-08 62.0 185 25.9
Oeu046900.1 Olea europaea HOM05D000307 ORTHO05D000166 7.2e-08 62.0 135 31.1
Oeu064601.1 Olea europaea HOM05D000307 ORTHO05D000166 7.2e-08 62.0 197 29.4
RcHm_v2.0_Chr2g0175531 Rosa chinensis HOM05D000307 ORTHO05D000166 7.2e-08 62.0 131 32.1
TAR381G0994 Trochodendron aralioides HOM05D000307 ORTHO05D000166 7.2e-08 62.0 133 29.3
MBI16_g16368_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 9.4e-08 61.6 177 29.9
MBI16_g16371_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 9.4e-08 61.6 175 29.1
PSO675G0191 Papaver somniferum HOM05D000307 ORTHO05D000166 9.4e-08 61.6 235 27.2
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 9.4e-08 61.6 181 27.1
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 9.4e-08 61.6 125 33.6
Aqoxy1G01191 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 1.2e-07 61.2 149 30.2
MD15G1430800 Malus domestica HOM05D000307 ORTHO05D013324 1.2e-07 61.2 85 37.6
Manes.15G161100 Manihot esculenta HOM05D028904 ORTHO05D000166 1.2e-07 61.2 196 27.6
AUR62002527 Chenopodium quinoa HOM05D000307 ORTHO05D000166 1.6e-07 60.8 64 43.8
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 1.6e-07 60.8 232 25.4
Nn5g28739 Nelumbo nucifera HOM05D000307 ORTHO05D000166 1.6e-07 60.8 145 29.7
ATR0605G195 Amborella trichopoda HOM05D000307 ORTHO05D000166 2.1e-07 60.5 175 28.6
DCAR_007932 Daucus carota HOM05D000307 ORTHO05D000166 2.1e-07 60.5 125 30.4
Lsat_1_v5_gn_9_60601 Lactuca sativa HOM05D000307 ORTHO05D000166 2.1e-07 60.5 146 30.8
Lj5g0004947 Lotus japonicus HOM05D000307 ORTHO05D000166 2.1e-07 60.5 148 31.1
Lj5g0023944 Lotus japonicus HOM05D000307 ORTHO05D000166 2.1e-07 60.5 148 31.1
Thecc.01G021900 Theobroma cacao HOM05D000307 ORTHO05D000166 2.1e-07 60.5 134 29.1
CDE02G2624 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 2.7e-07 60.1 128 28.9
Dinv29104 Davidia involucrata HOM05D000307 ORTHO05D000166 2.7e-07 60.1 239 26.4
MBI16_g19061_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 2.7e-07 60.1 175 29.1
PSO161G0058 Papaver somniferum HOM05D000307 ORTHO05D000166 2.7e-07 60.1 125 31.2
Rhsim08G0003700 Rhododendron simsii HOM05D000307 ORTHO05D000166 2.7e-07 60.1 142 29.6
PGSC0003DMG400027613 Solanum tuberosum HOM05D000307 ORTHO05D000166 2.7e-07 60.1 68 50.0
Thecc.01G119800 Theobroma cacao HOM05D000307 ORTHO05D000166 2.7e-07 60.1 138 29.7
TAR628G0497 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.7e-07 60.1 134 32.1
Nitab4.5_0007355g0010 Nicotiana tabacum HOM05D000307 ORTHO05D000166 3.6e-07 59.7 174 31.6
PSO161G0127 Papaver somniferum HOM05D000307 ORTHO05D000166 3.6e-07 59.7 125 31.2
PGR004G1959 Punica granatum HOM05D000307 ORTHO05D000166 3.6e-07 59.7 182 33.0
CiPaw.04G087000 Carya illinoinensis HOM05D000307 ORTHO05D000166 6.1e-07 58.9 144 32.6
DCAR_007934 Daucus carota HOM05D000307 ORTHO05D000166 6.1e-07 58.9 125 30.4
PGR083G0423 Punica granatum HOM05D000307 ORTHO05D000166 6.1e-07 58.9 77 36.4
Sc19g0002520 Simmondsia chinensis HOM05D000307 ORTHO05D000166 6.1e-07 58.9 92 33.7
Thecc.05G229400 Theobroma cacao HOM05D000307 ORTHO05D000166 6.1e-07 58.9 66 43.9
Zm00001eb219630 Zea mays HOM05D000307 ORTHO05D000166 6.1e-07 58.9 92 35.9
PGR042G1162 Punica granatum HOM05D000307 ORTHO05D000166 8.0e-07 58.5 159 29.6
Sabra16G0128300 Salix brachista HOM05D000307 ORTHO05D009271 8.0e-07 58.5 135 31.9
CSS0003566 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.0e-06 58.2 136 28.7
CSS0013985 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.0e-06 58.2 125 31.2
CAN.G855.4 Capsicum annuum HOM05D000307 ORTHO05D000166 1.0e-06 58.2 173 27.2
AUR62023664 Chenopodium quinoa HOM05D000307 ORTHO05D000166 1.0e-06 58.2 93 35.5
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 1.0e-06 58.2 216 27.3
MBI16_g19060_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.0e-06 58.2 154 31.2
PSO210G3286 Papaver somniferum HOM05D000307 ORTHO05D000166 1.0e-06 58.2 77 41.6
ATR0118G023 Amborella trichopoda HOM05D000307 ORTHO05D000166 1.4e-06 57.8 99 37.4
arahy.Tifrunner.gnm1.ann1.P24S13 Arachis hypogaea HOM05D000307 ORTHO05D000166 1.4e-06 57.8 59 44.1
Cfa002815 Carpinus fangiana HOM05D000307 ORTHO05D000166 1.4e-06 57.8 126 31.0
Glyma.08G095300 Glycine max HOM05D008089 ORTHO05D000166 1.4e-06 57.8 142 28.9
Atru.chr4.565 Acer truncatum HOM05D000307 ORTHO05D000166 1.8e-06 57.4 137 28.5
CDE05G0068 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 1.8e-06 57.4 64 48.4
Ciclev10027125m.g Citrus clementina HOM05D000307 ORTHO05D000166 1.8e-06 57.4 136 27.9
Ciclev10030228m.g Citrus clementina HOM05D000307 ORTHO05D000166 1.8e-06 57.4 137 28.5
Cc09_g03630 Coffea canephora HOM05D000307 ORTHO05D000166 1.8e-06 57.4 107 30.8
Haze_15022 Corylus avellana HOM05D000307 ORTHO05D000166 1.8e-06 57.4 64 48.4
Lalb_Chr05g0223381 Lupinus albus HOM05D000307 ORTHO05D000166 1.8e-06 57.4 138 30.4
Lalb_Chr15g0087771 Lupinus albus HOM05D000307 ORTHO05D000166 1.8e-06 57.4 170 28.2
Lalb_Chr20g0118971 Lupinus albus HOM05D000307 ORTHO05D000166 1.8e-06 57.4 77 39.0
PGR083G1169 Punica granatum HOM05D000307 ORTHO05D000166 1.8e-06 57.4 77 33.8
RcHm_v2.0_Chr5g0016461 Rosa chinensis HOM05D000307 ORTHO05D000166 1.8e-06 57.4 131 30.5
Sopen11g010690 Solanum pennellii HOM05D000307 ORTHO05D000166 1.8e-06 57.4 103 35.9
THA.LOC104801507 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 1.8e-06 57.4 167 26.3
Cpa.g.sc1153.1 Carica papaya HOM05D000307 ORTHO05D000166 2.3e-06 57.0 141 30.5
Cc02_g23180 Coffea canephora HOM05D000307 ORTHO05D000166 2.3e-06 57.0 136 28.7
Peaxi162Scf00076g01010 Petunia axillaris HOM05D000307 ORTHO05D000166 2.3e-06 57.0 126 34.9
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 2.3e-06 57.0 152 28.3
CSS0008018 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 3.0e-06 56.6 136 28.7
CSS0019629 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 3.0e-06 56.6 136 28.7
PGR042G3771 Punica granatum HOM05D000307 ORTHO05D000166 3.0e-06 56.6 148 33.8
CSS0028822 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 3.9e-06 56.2 200 25.5
CiPaw.04G086700 Carya illinoinensis HOM05D000307 ORTHO05D000166 3.9e-06 56.2 144 31.9
CDE11G0692 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 3.9e-06 56.2 141 30.5
Haze_25110 Corylus avellana HOM05D000307 ORTHO05D000166 3.9e-06 56.2 182 27.5
Glyma.08G095500 Glycine max HOM05D008089 ORTHO05D000166 3.9e-06 56.2 166 28.3
Prupe.1G533700 Prunus persica HOM05D000307 ORTHO05D000166 3.9e-06 56.2 193 25.9
VMungo0540G2484 Vigna mungo HOM05D000307 ORTHO05D000166 3.9e-06 56.2 64 37.5
ATR0626G033 Amborella trichopoda HOM05D000307 ORTHO05D000166 5.2e-06 55.8 131 32.1
Aqoxy2G02454 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 6.7e-06 55.5 158 30.4
arahy.Tifrunner.gnm1.ann1.XP8I2L Arachis hypogaea HOM05D000307 ORTHO05D000166 6.7e-06 55.5 64 42.2
CDE05G1214 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 6.7e-06 55.5 141 30.5
AUR62023662 Chenopodium quinoa HOM05D000307 ORTHO05D000166 6.7e-06 55.5 151 30.5
DCAR_007933 Daucus carota HOM05D000307 ORTHO05D000166 6.7e-06 55.5 163 28.8
DCAR_031306 Daucus carota HOM05D000307 ORTHO05D000166 6.7e-06 55.5 197 25.9
Lj1C1007T16 Lonicera japonica HOM05D000307 ORTHO05D000166 6.7e-06 55.5 137 29.2
Lalb_Chr20g0119031 Lupinus albus HOM05D000307 ORTHO05D000166 6.7e-06 55.5 68 42.6
Lalb_Chr20g0119051 Lupinus albus HOM05D000307 ORTHO05D000166 6.7e-06 55.5 68 42.6
Nitab4.5_0000365g0070 Nicotiana tabacum HOM05D000307 ORTHO05D000166 6.7e-06 55.5 167 29.9
PSO675G3259 Papaver somniferum HOM05D000307 ORTHO05D000166 6.7e-06 55.5 74 41.9
PGR083G0337 Punica granatum HOM05D000307 ORTHO05D000166 6.7e-06 55.5 194 24.2
Aqoxy2G02455 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 8.8e-06 55.1 158 29.7
arahy.Tifrunner.gnm1.ann1.137JBW Arachis hypogaea HOM05D000307 ORTHO05D000166 8.8e-06 55.1 64 40.6
arahy.Tifrunner.gnm1.ann1.V1US3H Arachis hypogaea HOM05D000307 ORTHO05D000166 8.8e-06 55.1 66 42.4
CSS0034462 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 8.8e-06 55.1 91 33.0
AUR62002528 Chenopodium quinoa HOM05D000307 ORTHO05D000166 8.8e-06 55.1 71 39.4
ECA246G5209 Erigeron canadensis HOM05D000307 ORTHO05D000166 8.8e-06 55.1 125 29.6
Eucgr.J02241 Eucalyptus grandis HOM05D000307 ORTHO05D000166 8.8e-06 55.1 242 24.8
Lsat_1_v5_gn_3_36000 Lactuca sativa HOM05D000307 ORTHO05D000166 8.8e-06 55.1 125 32.0
Lalb_Chr20g0119001 Lupinus albus HOM05D000307 ORTHO05D000166 8.8e-06 55.1 68 41.2
Lalb_Chr20g0119071 Lupinus albus HOM05D000307 ORTHO05D000166 8.8e-06 55.1 68 42.6
Lalb_Chr20g0119091 Lupinus albus HOM05D000307 ORTHO05D000166 8.8e-06 55.1 68 42.6
Potri.013G001700 Populus trichocarpa HOM05D000307 ORTHO05D000166 8.8e-06 55.1 64 42.2


User provided reference genes

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