Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28289 Nelumbo nucifera HOM05D000613 ORTHO05D276985 3.7e-76 288.1 145 100.0
Nn1g06670 Nelumbo nucifera HOM05D000613 ORTHO05D281552 5.1e-25 118.2 102 60.8
Nn4g26190 Nelumbo nucifera HOM05D000613 ORTHO05D000446 4.8e-23 111.7 65 83.1
Nn4g24006 Nelumbo nucifera HOM05D000028 ORTHO05D000701 2.6e-21 105.9 63 79.4
Nn4g25728 Nelumbo nucifera HOM05D000613 ORTHO05D000446 7.6e-21 104.4 68 73.5
Dinv44478 Davidia involucrata HOM05D000613 ORTHO05D000446 7.9e-10 67.8 72 51.4
TAR365G0724 Trochodendron aralioides HOM05D000613 ORTHO05D000446 7.9e-10 67.8 67 53.7
TAR636G2979 Trochodendron aralioides HOM05D000613 ORTHO05D000446 5.1e-09 65.1 50 58.0
TAR362G0655 Trochodendron aralioides HOM05D000613 ORTHO05D000446 6.7e-09 64.7 72 56.9
THA.LOC104822228 Tarenaya hassleriana HOM05D000613 ORTHO05D000446 2.0e-08 63.2 62 48.4
Manes.03G185000 Manihot esculenta HOM05D000613 ORTHO05D000446 3.3e-08 62.4 57 50.9
Rhsim04G0207300 Rhododendron simsii HOM05D000613 ORTHO05D000446 3.3e-08 62.4 71 47.9
TAR633G0117 Trochodendron aralioides HOM05D000613 ORTHO05D000446 3.3e-08 62.4 71 56.3
Cfa015579 Carpinus fangiana HOM05D000613 ORTHO05D000446 9.7e-08 60.8 69 49.3
COL.COLO4_09130 Corchorus olitorius HOM05D000613 ORTHO05D000446 9.7e-08 60.8 38 68.4
PSO170G4018 Papaver somniferum HOM05D000613 ORTHO05D000446 1.3e-07 60.5 72 48.6
QL12p022357 Quercus lobata HOM05D000613 ORTHO05D000446 1.3e-07 60.5 62 53.2
Nn1g02159 Nelumbo nucifera HOM05D000613 ORTHO05D000446 1.7e-07 60.1 65 46.2
vmacro08273 Vaccinium macrocarpon HOM05D000613 ORTHO05D000446 1.7e-07 60.1 70 45.7
Gohir.D11G126700 Gossypium hirsutum HOM05D000613 ORTHO05D000446 2.8e-07 59.3 38 65.8
Gorai.007G135400 Gossypium raimondii HOM05D000613 ORTHO05D000446 2.8e-07 59.3 38 65.8
Sc13g0003940 Simmondsia chinensis HOM05D000613 ORTHO05D000446 2.8e-07 59.3 65 44.6
RcHm_v2.0_Chr6g0291431 Rosa chinensis HOM05D000613 ORTHO05D000446 3.7e-07 58.9 50 54.0
Ciclev10005414m.g Citrus clementina HOM05D000613 ORTHO05D000446 4.8e-07 58.5 70 52.9
FAN27G3376 Fragaria x ananassa HOM05D000613 ORTHO05D000446 4.8e-07 58.5 43 65.1
PSO407G0415 Papaver somniferum HOM05D000613 ORTHO05D000446 4.8e-07 58.5 72 47.2
Thecc.01G282600 Theobroma cacao HOM05D000613 ORTHO05D000446 4.8e-07 58.5 50 54.0
GSVIVG01034295001 Vitis vinifera HOM05D000613 ORTHO05D000446 4.8e-07 58.5 38 68.4
Gohir.A11G121500 Gossypium hirsutum HOM05D000613 ORTHO05D000446 6.3e-07 58.2 38 63.2
Oeu060374.1 Olea europaea HOM05D000613 ORTHO05D000446 6.3e-07 58.2 70 45.7
Actinidia25366 Actinidia chinensis HOM05D000613 ORTHO05D000446 8.2e-07 57.8 76 46.1
Eucgr.K03385 Eucalyptus grandis HOM05D000613 ORTHO05D000446 8.2e-07 57.8 39 66.7
Thecc.04G221200 Theobroma cacao HOM05D000613 ORTHO05D000446 8.2e-07 57.8 70 47.1
FvH4_2g23840 Fragaria vesca HOM05D000613 ORTHO05D000446 1.4e-06 57.0 43 62.8
HanXRQChr03g0072551 Helianthus annuus HOM05D000613 ORTHO05D000446 1.4e-06 57.0 39 64.1
Cfa006115 Carpinus fangiana HOM05D000613 ORTHO05D000446 1.8e-06 56.6 66 50.0
Dinv11252 Davidia involucrata HOM05D000613 ORTHO05D000446 1.8e-06 56.6 36 72.2
Duzib133G0725 Durio zibethinus HOM05D000613 ORTHO05D000446 1.8e-06 56.6 50 52.0
Actinidia40193 Actinidia chinensis HOM05D000613 ORTHO05D000446 2.4e-06 56.2 68 50.0
AUR62030078 Chenopodium quinoa HOM05D000613 ORTHO05D000446 2.4e-06 56.2 71 42.3
Duzib151G0102 Durio zibethinus HOM05D000613 ORTHO05D000446 2.4e-06 56.2 68 50.0
Gohir.A10G114600 Gossypium hirsutum HOM05D000613 ORTHO05D000446 2.4e-06 56.2 64 48.4
Manes.15G022800 Manihot esculenta HOM05D000613 ORTHO05D000446 2.4e-06 56.2 61 57.4
Sc19g0004570 Simmondsia chinensis HOM05D000613 ORTHO05D000446 2.4e-06 56.2 37 59.5
Haze_04735 Corylus avellana HOM05D000613 ORTHO05D000446 3.1e-06 55.8 39 66.7
Duzib212G0212 Durio zibethinus HOM05D000613 ORTHO05D000446 3.1e-06 55.8 68 47.1
Gohir.D10G153100 Gossypium hirsutum HOM05D000613 ORTHO05D000446 3.1e-06 55.8 64 48.4
Gorai.011G169700 Gossypium raimondii HOM05D000613 ORTHO05D000446 3.1e-06 55.8 64 48.4
Oeu010297.1 Olea europaea HOM05D000613 ORTHO05D000446 3.1e-06 55.8 41 61.0
Psat6g060960 Pisum sativum HOM05D000613 ORTHO05D000446 3.1e-06 55.8 55 43.6
Prupe.8G243600 Prunus persica HOM05D000613 ORTHO05D000446 3.1e-06 55.8 70 47.1
TWI14G1291 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 3.1e-06 55.8 42 57.1
Duzib211G0239 Durio zibethinus HOM05D000613 ORTHO05D000446 4.1e-06 55.5 51 51.0
MD11G1288800 Malus domestica HOM05D000613 ORTHO05D000446 4.1e-06 55.5 38 63.2
Actinidia09150 Actinidia chinensis HOM05D000613 ORTHO05D000446 5.3e-06 55.1 72 45.8
EL10Ac3g06345 Beta vulgaris HOM05D000613 ORTHO05D000446 5.3e-06 55.1 56 42.9
Ca_09768_v3 Cicer arietinum L. HOM05D000613 ORTHO05D000446 5.3e-06 55.1 65 41.5
FAN24G0285 Fragaria x ananassa HOM05D000613 ORTHO05D000446 5.3e-06 55.1 43 60.5
Gorai.007G147200 Gossypium raimondii HOM05D000613 ORTHO05D000446 5.3e-06 55.1 38 63.2
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 6.9e-06 54.7 54 44.4
Dinv38392 Davidia involucrata HOM05D000613 ORTHO05D000446 6.9e-06 54.7 71 46.5
FAN20G1685 Fragaria x ananassa HOM05D000613 ORTHO05D000446 6.9e-06 54.7 43 60.5
MD13G1182800 Malus domestica HOM05D000613 ORTHO05D000446 9.1e-06 54.3 70 44.3
PGR004G1078 Punica granatum HOM05D000613 ORTHO05D000446 9.1e-06 54.3 59 52.5
PGR031G1191 Punica granatum HOM05D000613 ORTHO05D000446 9.1e-06 54.3 39 66.7
TWI53G1481 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 9.1e-06 54.3 56 50.0


User provided reference genes

Program Settings