Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28233 Nelumbo nucifera HOM05D000092 ORTHO05D048583 6.5e-77 290.8 164 100.0
Nn5g28232 Nelumbo nucifera HOM05D000092 ORTHO05D000042 7.8e-22 107.8 160 42.5
Prupe.1G542800 Prunus persica HOM05D000092 ORTHO05D000042 2.5e-12 76.3 154 31.2
Dinv41192 Davidia involucrata HOM05D000092 ORTHO05D000042 6.2e-11 71.6 150 31.3
Hma1.2p1_0811F.1_g222060 Hydrangea macrophylla HOM05D000092 ORTHO05D000042 8.1e-11 71.2 132 32.6
TAR369G0208 Trochodendron aralioides HOM05D000092 ORTHO05D000042 8.1e-11 71.2 132 34.1
TAR369G1062 Trochodendron aralioides HOM05D000092 ORTHO05D000042 8.1e-11 71.2 132 34.1
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 1.4e-10 70.5 119 34.5
GSVIVG01029290001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.8e-10 70.1 132 33.3
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-10 69.7 127 33.1
Dinv15264 Davidia involucrata HOM05D000092 ORTHO05D000042 5.2e-10 68.6 129 31.0
Dinv15266 Davidia involucrata HOM05D000092 ORTHO05D000042 5.2e-10 68.6 129 31.0
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-09 67.4 113 33.6
MD11G1019800 Malus domestica HOM05D000092 ORTHO05D000042 1.2e-09 67.4 119 33.6
MBI11_g10519_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.5e-09 67.0 152 32.2
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-09 65.9 130 32.3
MBI11_g47636_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.4e-09 65.9 140 31.4
TAR243G0002 Trochodendron aralioides HOM05D000092 ORTHO05D000042 3.4e-09 65.9 128 31.2
FAN24G3513 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.4e-09 65.5 140 32.1
TAR369G0238 Trochodendron aralioides HOM05D001594 ORTHO05D002862 5.8e-09 65.1 132 28.8
Aqoxy2G01384 Aquilegia oxysepala HOM05D000092 ORTHO05D000042 7.6e-09 64.7 143 29.4
Ciclev10018706m.g Citrus clementina HOM05D000092 ORTHO05D000042 7.6e-09 64.7 145 29.7
Dinv16343 Davidia involucrata HOM05D000092 ORTHO05D000042 7.6e-09 64.7 146 31.5
FAN27G2027 Fragaria x ananassa HOM05D000428 ORTHO05D000582 7.6e-09 64.7 127 29.9
Aqoxy4G01442 Aquilegia oxysepala HOM05D000092 ORTHO05D000042 9.9e-09 64.3 133 30.1
FvH4_2g05721 Fragaria vesca HOM05D000092 ORTHO05D000042 9.9e-09 64.3 127 28.3
RcHm_v2.0_Chr6g0256601 Rosa chinensis HOM05D000092 ORTHO05D000042 9.9e-09 64.3 117 31.6
Dinv03247 Davidia involucrata HOM05D000092 ORTHO05D000042 1.3e-08 63.9 113 32.7
Thecc.05G225500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.3e-08 63.9 127 30.7
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-08 63.5 134 32.1
MBI11_g41125_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.2e-08 63.2 154 30.5
TAR369G0206 Trochodendron aralioides HOM05D000092 ORTHO05D000042 2.2e-08 63.2 146 28.8
TAR369G0653 Trochodendron aralioides HOM05D000092 ORTHO05D000042 2.2e-08 63.2 148 28.4
Dinv40446 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-08 62.8 130 29.2
CSS0049903 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.8e-08 62.4 133 30.1
COL.COLO4_13565 Corchorus olitorius HOM05D000092 ORTHO05D000042 3.8e-08 62.4 133 30.1
Dinv15263 Davidia involucrata HOM05D000092 ORTHO05D000042 3.8e-08 62.4 129 29.5
Dinv15265 Davidia involucrata HOM05D000092 ORTHO05D000042 3.8e-08 62.4 129 29.5
Thecc.05G296000 Theobroma cacao HOM05D000092 ORTHO05D000042 3.8e-08 62.4 127 32.3
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 4.9e-08 62.0 127 29.9
FAN24G0461 Fragaria x ananassa HOM05D000428 ORTHO05D000582 4.9e-08 62.0 127 29.1
Thecc.05G296200 Theobroma cacao HOM05D000092 ORTHO05D000042 4.9e-08 62.0 120 32.5
Atru.chr8.2609 Acer truncatum HOM05D000092 ORTHO05D000042 6.4e-08 61.6 142 31.0
Actinidia38185 Actinidia chinensis HOM05D000092 ORTHO05D000042 6.4e-08 61.6 137 29.9
FvH4_2g36800 Fragaria vesca HOM05D000092 ORTHO05D000042 6.4e-08 61.6 134 31.3
FvH4_5g18991 Fragaria vesca HOM05D000092 ORTHO05D000042 6.4e-08 61.6 144 29.9
MBI11_g12656_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.4e-08 61.6 138 30.4
MD15G1398500 Malus domestica HOM05D000092 ORTHO05D000042 6.4e-08 61.6 129 29.5
Nn5g27594 Nelumbo nucifera HOM05D000092 ORTHO05D000042 6.4e-08 61.6 132 29.5
FAN18G2363 Fragaria x ananassa HOM05D000092 ORTHO05D000042 8.4e-08 61.2 124 31.5
RcHm_v2.0_Chr6g0281031 Rosa chinensis HOM05D000092 ORTHO05D000042 8.4e-08 61.2 128 31.2
Dinv12837 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-07 60.8 143 28.7
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-07 60.8 149 28.2
Dinv25011 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-07 60.8 123 30.1
Prupe.3G016700 Prunus persica HOM05D000092 ORTHO05D000042 1.1e-07 60.8 145 25.5
QL07p019286 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-07 60.8 128 31.2
Rhsim05G0218900 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.1e-07 60.8 115 31.3
CSS0033810 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.4e-07 60.5 123 30.1
CSS0045612 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.4e-07 60.5 129 29.5
MBI18_g45951_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 1.4e-07 60.5 166 27.1
Rhsim05G0218300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.4e-07 60.5 115 31.3
Aqoxy1G03758 Aquilegia oxysepala HOM05D000092 ORTHO05D000042 1.9e-07 60.1 145 28.3
CiPaw.16G012100 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.9e-07 60.1 133 29.3
CiPaw.16G056500 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.9e-07 60.1 129 27.9
Duzib177G0651 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-07 60.1 136 28.7
Dinv02871 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-07 59.7 142 28.2
MBI18_g46232_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 2.4e-07 59.7 120 30.0
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 59.3 114 35.1
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 59.3 117 30.8
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 59.3 117 30.8
Dinv20774 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 59.3 142 28.2
FvH4_6g02713 Fragaria vesca HOM05D000092 ORTHO05D000042 3.2e-07 59.3 129 27.9
Lj6C205T0 Lonicera japonica HOM05D000092 ORTHO05D000042 3.2e-07 59.3 130 31.5
Lj6P229T19 Lonicera japonica HOM05D000092 ORTHO05D016306 3.2e-07 59.3 118 29.7
TAR636G3578 Trochodendron aralioides HOM05D000092 ORTHO05D000042 3.2e-07 59.3 149 30.2
CiPaw.16G011600 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.2e-07 58.9 119 30.3
COL.COLO4_13567 Corchorus olitorius HOM05D000092 ORTHO05D000042 4.2e-07 58.9 118 33.1
FvH4_5g18950 Fragaria vesca HOM05D000092 ORTHO05D000042 4.2e-07 58.9 144 29.2
FvH4_6g02820 Fragaria vesca HOM05D000092 ORTHO05D000042 4.2e-07 58.9 129 27.1
Rhsim05G0217600 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.2e-07 58.9 130 29.2
Aqoxy4G01567 Aquilegia oxysepala HOM05D000092 ORTHO05D000042 5.4e-07 58.5 145 27.6
CSS0042836 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.4e-07 58.5 143 27.3
Dinv03241 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-07 58.5 128 29.7
Dinv07591 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-07 58.5 148 26.4
Dinv20559 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-07 58.5 127 29.1
Dinv20737 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-07 58.5 127 29.1
MBI11_g42074_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.4e-07 58.5 138 30.4
Dinv02211 Davidia involucrata HOM05D000092 ORTHO05D000042 7.1e-07 58.2 148 26.4
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 7.1e-07 58.2 148 29.7
Dinv10920 Davidia involucrata HOM05D000092 ORTHO05D000042 7.1e-07 58.2 118 29.7
Potri.005G062130 Populus trichocarpa HOM05D000092 ORTHO05D000042 7.1e-07 58.2 128 26.6
CSS0004067 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 9.3e-07 57.8 139 27.3
FAN14G3488 Fragaria x ananassa HOM05D002568 ORTHO05D002814 9.3e-07 57.8 144 28.5
FAN14G4312 Fragaria x ananassa HOM05D002568 ORTHO05D002814 9.3e-07 57.8 144 28.5
Lj6A185T29 Lonicera japonica HOM05D000092 ORTHO05D000042 9.3e-07 57.8 145 29.0
Potri.005G061860 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.3e-07 57.8 128 25.8
FvH4_6g02790 Fragaria vesca HOM05D001069 ORTHO05D001549 1.2e-06 57.4 142 27.5
Rhsim04G0114400 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.2e-06 57.4 117 27.4
vmacro09348 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.2e-06 57.4 127 27.6
Actinidia38187 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.6e-06 57.0 138 26.8
Cpa.g.c28428.2 Carica papaya HOM05D000092 ORTHO05D000042 1.6e-06 57.0 127 30.7
Lj6C201T1 Lonicera japonica HOM05D000092 ORTHO05D000042 1.6e-06 57.0 156 26.9
CiPaw.16G011800 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.1e-06 56.6 142 28.2
Dinv25006 Davidia involucrata HOM05D000092 ORTHO05D000042 2.1e-06 56.6 110 33.6
MBI11_g08228_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000089 2.1e-06 56.6 138 30.4
MBI11_g40807_MAGBIO Magnolia biondii HOM05D022960 ORTHO05D013107 2.1e-06 56.6 129 29.5
MBI18_g21248_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D048583 2.1e-06 56.6 52 48.1
Ciclev10018626m.g Citrus clementina HOM05D000092 ORTHO05D000042 2.7e-06 56.2 107 31.8
Dinv12836 Davidia involucrata HOM05D000092 ORTHO05D000042 2.7e-06 56.2 145 27.6
Manes.16G009000 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-06 56.2 128 28.9
TAR636G0203 Trochodendron aralioides HOM05D000092 ORTHO05D000042 2.7e-06 56.2 109 29.4
Cpa.g.sc504.1 Carica papaya HOM05D000092 ORTHO05D000042 3.5e-06 55.8 130 40.0
Rhsim04G0053900 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.5e-06 55.8 127 26.8
Rhsim05G0065200 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.5e-06 55.8 131 28.2
arahy.Tifrunner.gnm1.ann1.BPD95K Arachis hypogaea HOM05D000092 ORTHO05D000042 4.6e-06 55.5 114 31.6
Dinv10937 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-06 55.5 140 27.1
MBI17_g24633_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.6e-06 55.5 122 32.8
QL07p010483 Quercus lobata HOM05D000092 ORTHO05D000042 4.6e-06 55.5 152 27.6
GSVIVG01021955001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.6e-06 55.5 117 28.2
Ciclev10003533m.g Citrus clementina HOM05D000092 ORTHO05D000042 6.0e-06 55.1 146 28.1
Dinv25002 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-06 55.1 110 32.7
Dinv25017 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-06 55.1 125 32.0
FvH4_6g02760 Fragaria vesca HOM05D000092 ORTHO05D000042 6.0e-06 55.1 144 27.1
FAN12G1705 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.0e-06 55.1 144 26.4
Lj6C197T3 Lonicera japonica HOM05D000092 ORTHO05D000042 6.0e-06 55.1 125 27.2
Lj6C226T7 Lonicera japonica HOM05D000092 ORTHO05D011915 6.0e-06 55.1 128 28.1
RcHm_v2.0_Chr6g0282051 Rosa chinensis HOM05D000092 ORTHO05D000042 6.0e-06 55.1 142 26.8
RcHm_v2.0_Chr7g0204231 Rosa chinensis HOM05D000092 ORTHO05D000042 6.0e-06 55.1 137 28.5
arahy.Tifrunner.gnm1.ann1.TXZ93S Arachis hypogaea HOM05D000092 ORTHO05D000042 7.8e-06 54.7 114 31.6
Ciclev10000228m.g Citrus clementina HOM05D000092 ORTHO05D000042 7.8e-06 54.7 147 27.2
Ciclev10013993m.g Citrus clementina HOM05D000092 ORTHO05D000042 7.8e-06 54.7 147 27.2
Ciclev10013995m.g Citrus clementina HOM05D000092 ORTHO05D000042 7.8e-06 54.7 147 27.2
COL.COLO4_13532 Corchorus olitorius HOM05D000092 ORTHO05D000042 7.8e-06 54.7 121 29.8
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 7.8e-06 54.7 174 23.6
Lj1C1098T2 Lonicera japonica HOM05D000092 ORTHO05D000042 7.8e-06 54.7 123 26.0
RcHm_v2.0_Chr7g0203421 Rosa chinensis HOM05D000092 ORTHO05D000042 7.8e-06 54.7 132 27.3
VMungo0464G1116 Vigna mungo HOM05D000092 ORTHO05D000042 7.8e-06 54.7 121 28.1


User provided reference genes

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