Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28025 Nelumbo nucifera HOM05D026975 ORTHO05D000252 4.9e-81 304.7 185 100.0
Nn5g28012 Nelumbo nucifera HOM05D026975 ORTHO05D000252 2.4e-80 302.4 183 100.0
Nn5g28008 Nelumbo nucifera HOM05D026975 ORTHO05D000252 3.5e-79 298.5 183 98.9
Nn3g17829 Nelumbo nucifera HOM05D000401 ORTHO05D000252 3.5e-55 218.8 178 79.8
Nn4g22321 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.0e-46 190.7 181 72.9
Nn2g11738 Nelumbo nucifera HOM05D000401 ORTHO05D000252 9.1e-35 151.0 185 60.5
Nn3g18352 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.9e-33 146.0 119 84.9
TAR383G0966 Trochodendron aralioides HOM05D000401 ORTHO05D000252 8.5e-17 91.3 90 58.9
TAR636G3668 Trochodendron aralioides HOM05D026975 ORTHO05D000252 2.5e-16 89.7 108 50.0
Duzib168G1191 Durio zibethinus HOM05D000401 ORTHO05D000252 2.7e-15 86.3 204 36.3
Nn8g39175 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.3e-14 83.2 181 48.6
MBI01_g06514_MAGBIO Magnolia biondii HOM05D000401 ORTHO05D000252 1.8e-11 73.6 181 35.9
Manes.16G115800 Manihot esculenta HOM05D000401 ORTHO05D000252 2.4e-11 73.2 186 37.6
TAR624G0530 Trochodendron aralioides HOM05D000401 ORTHO05D000252 2.4e-11 73.2 176 35.8
Gohir.D06G061200 Gossypium hirsutum HOM05D000401 ORTHO05D000252 4.5e-10 68.9 182 35.7
VMungo0251G1019 Vigna mungo HOM05D000401 ORTHO05D000252 5.9e-10 68.6 104 44.2
Manes.03G020900 Manihot esculenta HOM05D000401 ORTHO05D000252 7.7e-10 68.2 101 48.5
Thecc.09G110000 Theobroma cacao HOM05D000401 ORTHO05D000252 2.3e-09 66.6 208 30.8
Gorai.010G071300 Gossypium raimondii HOM05D000401 ORTHO05D000252 3.8e-09 65.9 182 34.6
Gohir.D05G024800 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.5e-09 65.1 203 33.5
Gorai.009G024900 Gossypium raimondii HOM05D000401 ORTHO05D000252 6.5e-09 65.1 203 33.5
Gohir.A05G023300 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.1e-08 64.3 83 54.2
Phvul.002G313000 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 1.5e-08 63.9 109 40.4
Duzib187G1081 Durio zibethinus HOM05D000401 ORTHO05D000252 3.2e-08 62.8 208 29.3
Dinv36634 Davidia involucrata HOM05D000401 ORTHO05D000252 4.2e-08 62.4 89 43.8
Sabra06G0123700 Salix brachista HOM05D000401 ORTHO05D000252 5.5e-08 62.0 105 48.6
Potri.018G080100 Populus trichocarpa HOM05D000401 ORTHO05D000252 7.2e-08 61.6 84 51.2
Actinidia20371 Actinidia chinensis HOM05D000401 ORTHO05D000252 9.5e-08 61.2 90 46.7
AUR62021503 Chenopodium quinoa HOM05D000401 ORTHO05D000252 9.5e-08 61.2 159 37.7
Duzib150G0467 Durio zibethinus HOM05D000401 ORTHO05D000252 4.7e-07 58.9 71 50.7
Gohir.A07G006200 Gossypium hirsutum HOM05D000401 ORTHO05D000252 8.0e-07 58.2 82 50.0
Gorai.001G005400 Gossypium raimondii HOM05D000401 ORTHO05D000252 8.0e-07 58.2 82 50.0
Peaxi162Scf00546g00005 Petunia axillaris HOM05D000401 ORTHO05D000252 1.8e-06 57.0 158 40.5
Gohir.A06G062901 Gossypium hirsutum HOM05D000401 ORTHO05D000252 2.3e-06 56.6 184 33.2
Sabra18G0068000 Salix brachista HOM05D000401 ORTHO05D000252 2.3e-06 56.6 191 31.9
Gohir.D07G005800 Gossypium hirsutum HOM05D000401 ORTHO05D000252 3.0e-06 56.2 82 48.8
FAN26G3034 Fragaria x ananassa HOM05D000401 ORTHO05D000252 4.0e-06 55.8 78 48.7
TWI09G1341 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 4.0e-06 55.8 122 41.0


User provided reference genes

Program Settings