Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28009 Nelumbo nucifera HOM05D000393 ORTHO05D000275 1.8e-78 295.8 150 100.0
Nn5g28011 Nelumbo nucifera HOM05D000393 ORTHO05D000275 5.2e-49 198.0 122 84.4
Nn7g35991 Nelumbo nucifera HOM05D000393 ORTHO05D000275 9.0e-41 170.6 103 82.5
Nn5g30341 Nelumbo nucifera HOM05D000393 ORTHO05D000275 1.1e-25 120.6 72 80.6
Nn2g15708 Nelumbo nucifera HOM05D000393 ORTHO05D000275 2.4e-25 119.4 106 57.5
TAR623G0315 Trochodendron aralioides HOM05D000393 ORTHO05D000275 3.7e-18 95.5 106 52.8
TAR633G1368 Trochodendron aralioides HOM05D000393 ORTHO05D000275 6.5e-15 84.7 107 47.7
Thecc.05G173900 Theobroma cacao HOM05D000393 ORTHO05D000275 1.4e-14 83.6 100 49.0
Duzib128G0934 Durio zibethinus HOM05D000393 ORTHO05D000275 4.2e-14 82.0 96 50.0
TAR369G0902 Trochodendron aralioides HOM05D000393 ORTHO05D000275 5.5e-14 81.6 103 46.6
MBI13_g20488_MAGBIO Magnolia biondii HOM05D000393 ORTHO05D000275 2.7e-13 79.3 106 47.2
CiPaw.10G025800 Carya illinoinensis HOM05D000393 ORTHO05D000275 3.6e-13 79.0 110 43.6
Cc06_g15740 Coffea canephora HOM05D000393 ORTHO05D000275 3.6e-13 79.0 101 46.5
Duzib106G2005 Durio zibethinus HOM05D000393 ORTHO05D000275 3.6e-13 79.0 100 50.0
Cfa020153 Carpinus fangiana HOM05D000393 ORTHO05D000275 4.6e-13 78.6 114 44.7
Haze_20007 Corylus avellana HOM05D000393 ORTHO05D000275 1.0e-12 77.4 116 46.6
Potri.016G059000 Populus trichocarpa HOM05D000393 ORTHO05D000275 2.3e-12 76.3 114 41.2
Dinv24061 Davidia involucrata HOM05D000393 ORTHO05D000275 3.9e-12 75.5 101 45.5
CiPaw.09G029400 Carya illinoinensis HOM05D000393 ORTHO05D000275 6.7e-12 74.7 103 47.6
Gohir.A04G057100 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.7e-12 74.7 101 47.5
Gohir.A09G128700 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.7e-12 74.7 100 50.0
Gohir.D04G089800 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.7e-12 74.7 101 47.5
Gohir.D09G124700 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.7e-12 74.7 100 50.0
Gorai.006G143600 Gossypium raimondii HOM05D000393 ORTHO05D000275 6.7e-12 74.7 100 50.0
Prupe.7G079300 Prunus persica HOM05D000393 ORTHO05D000275 6.7e-12 74.7 100 49.0
Potri.006G193700 Populus trichocarpa HOM05D000393 ORTHO05D000275 1.1e-11 73.9 103 46.6
Duzib093G1901 Durio zibethinus HOM05D000393 ORTHO05D000275 1.9e-11 73.2 102 45.1
Sabra16G0061800 Salix brachista HOM05D000393 ORTHO05D000275 2.5e-11 72.8 99 43.4
QL07p024207 Quercus lobata HOM05D000393 ORTHO05D000275 4.3e-11 72.0 102 46.1
Gorai.012G100100 Gossypium raimondii HOM05D000393 ORTHO05D000275 5.7e-11 71.6 101 46.5
Dinv43933 Davidia involucrata HOM05D000393 ORTHO05D000275 7.4e-11 71.2 114 42.1
TAR636G2500 Trochodendron aralioides HOM05D000393 ORTHO05D000275 2.2e-10 69.7 105 43.8
SalBow6G3259 Salvia bowleyana HOM05D000393 ORTHO05D000275 4.8e-10 68.6 98 41.8
COL.COLO4_29338 Corchorus olitorius HOM05D000393 ORTHO05D000275 8.2e-10 67.8 107 41.1
Actinidia38588 Actinidia chinensis HOM05D000393 ORTHO05D000275 1.1e-09 67.4 111 40.5
Dinv14317 Davidia involucrata HOM05D000393 ORTHO05D000275 1.4e-09 67.0 106 43.4
Cpa.g.sc85.56 Carica papaya HOM05D000393 ORTHO05D000275 2.4e-09 66.2 102 45.1
MD14G1056200 Malus domestica HOM05D000393 ORTHO05D000275 4.1e-09 65.5 102 47.1
Manes.08G043900 Manihot esculenta HOM05D000393 ORTHO05D000275 1.2e-08 63.9 100 45.0
Actinidia17279 Actinidia chinensis HOM05D000393 ORTHO05D000275 5.9e-08 61.6 111 37.8
MD12G1055800 Malus domestica HOM05D000393 ORTHO05D000275 5.9e-08 61.6 102 42.2
MSTRG.6488 Avicennia marina HOM05D000393 ORTHO05D000275 7.7e-08 61.2 111 33.3
Atru.chr8.1134 Acer truncatum HOM05D000393 ORTHO05D000275 1.0e-07 60.8 102 42.2
Rhsim03G0005200 Rhododendron simsii HOM05D000393 ORTHO05D000275 1.3e-07 60.5 116 40.5
TWI53G0216 Tripterygium wilfordii HOM05D000393 ORTHO05D000275 1.3e-07 60.5 99 41.4
Actinidia22047 Actinidia chinensis HOM05D000393 ORTHO05D000275 1.7e-07 60.1 102 36.3
MELO3C023514.2 Cucumis melo HOM05D000393 ORTHO05D000275 2.2e-07 59.7 107 39.3
Manes.09G036500 Manihot esculenta HOM05D000393 ORTHO05D000275 3.8e-07 58.9 101 42.6
Aqoxy1G00131 Aquilegia oxysepala HOM05D000393 ORTHO05D000275 5.0e-07 58.5 121 38.0
ClCG09G003800 Citrullus lanatus HOM05D000393 ORTHO05D000275 5.0e-07 58.5 109 37.6
RcHm_v2.0_Chr3g0479361 Rosa chinensis HOM05D000393 ORTHO05D000275 5.0e-07 58.5 101 43.6
FAN14G3370 Fragaria x ananassa HOM05D000393 ORTHO05D000275 6.5e-07 58.2 101 44.6
TWI74G1115 Tripterygium wilfordii HOM05D000393 ORTHO05D000275 6.5e-07 58.2 100 43.0
Oeu063870.1 Olea europaea HOM05D000393 ORTHO05D000275 1.4e-06 57.0 103 40.8
CsaV3_7G031430 Cucumis sativus L. HOM05D000393 ORTHO05D000275 1.9e-06 56.6 107 37.4
GSVIVG01001366001 Vitis vinifera HOM05D000393 ORTHO05D000275 2.5e-06 56.2 113 40.7
VMungo0720G1724 Vigna mungo HOM05D000393 ORTHO05D000275 4.2e-06 55.5 102 40.2
FAN02G1510 Fragaria x ananassa HOM05D000393 ORTHO05D000275 5.5e-06 55.1 101 40.6
Manes.10G151200 Manihot esculenta HOM05D000393 ORTHO05D000275 5.5e-06 55.1 108 35.2
Oeu006202.1 Olea europaea HOM05D000393 ORTHO05D000275 5.5e-06 55.1 98 36.7
Ciclev10013382m.g Citrus clementina HOM05D000393 ORTHO05D000275 7.2e-06 54.7 100 39.0
FAN05G0015 Fragaria x ananassa HOM05D000393 ORTHO05D000275 9.4e-06 54.3 101 43.6
Phvul.007G260900 Phaseolus vulgaris HOM05D000393 ORTHO05D000275 9.4e-06 54.3 102 41.2


User provided reference genes

Program Settings