Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 2.9e-125 451.8 215 100.0
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.0e-58 230.7 153 78.4
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 7.0e-47 191.4 153 65.4
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 1.1e-42 177.6 146 65.1
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 1.3e-40 170.6 150 62.0
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 8.4e-32 141.4 151 53.0
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 3.2e-31 139.4 147 53.7
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 7.1e-31 138.3 154 51.3
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 6.0e-30 135.2 153 51.6
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 3.9e-29 132.5 160 48.1
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.1e-28 131.0 100 67.0
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 2.5e-28 129.8 142 51.4
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 9.6e-28 127.9 130 53.8
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 1.2e-27 127.5 151 49.7
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 1.6e-27 127.1 115 60.9
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.1e-27 126.7 151 49.0
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 2.8e-27 126.3 137 52.6
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 2.8e-27 126.3 140 49.3
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 3.6e-27 125.9 153 49.0
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 6.2e-27 125.2 151 48.3
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 6.2e-27 125.2 143 49.7
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 6.2e-27 125.2 103 65.0
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 6.2e-27 125.2 139 49.6
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 8.1e-27 124.8 171 45.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 1.1e-26 124.4 106 61.3
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.1e-26 124.4 130 53.8
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 2.4e-26 123.2 148 48.0
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 3.1e-26 122.9 133 50.4
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 5.2e-26 122.1 96 64.6
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 5.2e-26 122.1 147 47.6
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 6.9e-26 121.7 100 64.0
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 3.4e-25 119.4 100 64.0
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 4.4e-25 119.0 148 44.6
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 4.4e-25 119.0 100 63.0
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 4.4e-25 119.0 100 63.0
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 9.9e-25 117.9 142 44.4
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 9.9e-25 117.9 94 59.6
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.7e-24 117.1 135 45.9
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 1.7e-24 117.1 139 47.5
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 2.2e-24 116.7 135 46.7
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 2.9e-24 116.3 97 61.9
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 4.9e-24 115.5 140 52.1
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 4.9e-24 115.5 149 44.3
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 8.4e-24 114.8 135 45.2
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 1.1e-23 114.4 137 49.6
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.4e-23 114.0 188 41.0
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.4e-23 114.0 156 43.6
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 9.3e-23 111.3 94 59.6
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 4.3e-20 102.4 121 47.1
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 9.6e-20 101.3 138 42.8
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 2.1e-19 100.1 151 39.7
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 2.1e-19 100.1 112 49.1
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 8.1e-19 98.2 97 51.5
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.4e-18 97.4 119 45.4
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 4.0e-18 95.9 103 55.3
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 9.9e-17 91.3 96 49.0
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 3.0e-13 79.7 74 56.8
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.1e-12 77.8 98 44.9
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 2.4e-10 70.1 47 72.3
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 1.7e-08 63.9 48 64.6
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 2.2e-08 63.5 97 43.3
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 2.9e-08 63.2 91 40.7
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.2e-07 59.3 103 38.8
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.6e-06 57.4 99 39.4


User provided reference genes

Program Settings