Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.6e-106 387.9 192 100.0
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.5e-56 223.4 186 61.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.6e-34 149.1 176 51.7
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 8.0e-34 147.9 190 50.0
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.0e-33 146.0 184 50.5
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 4.2e-27 125.6 208 39.4
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.6e-26 122.5 209 37.8
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 4.7e-26 122.1 197 40.6
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.8e-25 120.2 204 39.2
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 5.2e-25 118.6 211 38.9
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.5e-24 117.1 216 34.7
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.6e-24 116.3 192 40.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 4.4e-24 115.5 195 37.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 9.8e-24 114.4 190 39.5
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 2.2e-23 113.2 196 36.2
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 2.2e-23 113.2 196 36.2
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.7e-23 112.5 208 38.0
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 6.3e-23 111.7 205 38.0
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.4e-22 110.5 215 33.5
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 3.1e-22 109.4 172 41.9
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.4e-22 108.6 193 37.8
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 7.0e-22 108.2 205 39.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.1e-22 107.8 212 35.4
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 9.1e-22 107.8 188 37.8
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.2e-21 107.5 205 39.0
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.2e-21 107.5 202 36.6
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.6e-21 107.1 214 35.0
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 1.6e-21 107.1 190 37.9
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.0e-21 106.7 214 35.0
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 2.7e-21 106.3 205 36.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 2.7e-21 106.3 216 35.6
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.7e-21 106.3 190 37.9
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 7.7e-21 104.8 220 34.1
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 7.7e-21 104.8 211 33.2
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 7.7e-21 104.8 191 38.2
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 7.7e-21 104.8 198 37.4
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.0e-20 104.4 207 33.8
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.3e-20 104.0 189 37.0
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.3e-20 104.0 205 35.1
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 2.3e-20 103.2 187 36.9
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.9e-20 102.8 163 39.3
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 3.8e-20 102.4 223 32.3
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.6e-20 101.7 208 38.5
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 6.6e-20 101.7 202 36.1
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.5e-19 100.5 172 35.5
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-19 100.5 214 34.1
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-19 100.5 214 34.6
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.5e-19 100.5 203 34.0
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 1.9e-19 100.1 215 34.4
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.9e-19 100.1 215 34.9
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.5e-19 99.8 197 36.0
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 4.2e-19 99.0 164 39.0
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 5.5e-19 98.6 173 35.8
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.2e-18 97.4 207 33.8
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.2e-18 97.4 201 33.3
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.1e-18 96.7 198 36.9
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.6e-18 95.9 207 34.8
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 4.7e-18 95.5 204 33.8
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 4.7e-18 95.5 169 33.7
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 2.3e-17 93.2 168 36.9
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 2.3e-17 93.2 194 39.7
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 2.3e-17 93.2 168 37.5
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.8e-17 91.7 213 32.9
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 6.8e-17 91.7 188 36.7
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 2.0e-16 90.1 185 34.1
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.0e-16 90.1 183 34.4
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 3.4e-16 89.4 163 33.7
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 4.4e-16 89.0 165 36.4
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 4.4e-16 89.0 165 36.4
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 4.4e-16 89.0 189 34.9
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 5.7e-16 88.6 208 32.2
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.7e-16 88.6 213 30.5
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 5.7e-16 88.6 161 37.3
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 5.7e-16 88.6 161 37.3
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 1.3e-15 87.4 162 35.8
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.3e-15 87.4 199 33.7
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 1.7e-15 87.0 209 32.5
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 3.7e-15 85.9 164 34.8
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 6.3e-15 85.1 212 32.1
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.1e-14 84.3 173 32.9
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 1.8e-14 83.6 168 39.9
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.8e-14 83.6 176 33.5
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.8e-14 83.6 193 36.8
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 2.4e-14 83.2 221 32.1
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 7.0e-14 81.6 186 33.3
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 9.2e-14 81.3 127 40.2
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 9.2e-14 81.3 205 34.1
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 1.2e-13 80.9 147 36.7
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.6e-13 80.5 228 30.3
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 4.5e-13 79.0 218 28.9
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 5.9e-13 78.6 146 33.6
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 2.9e-12 76.3 194 33.5
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 2.5e-11 73.2 197 32.0
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 9.5e-11 71.2 147 33.3
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 3.6e-10 69.3 264 28.0
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.0e-09 67.8 137 35.8
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.1e-09 66.2 119 41.2
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 2.0e-08 63.5 199 31.2
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 5.8e-08 62.0 153 32.7
PSO170G6318 Papaver somniferum HOM05D047867 ORTHO05D050185 1.7e-07 60.5 175 30.3
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 2.2e-07 60.1 164 30.5
MBI03_g11135_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 4.9e-07 58.9 138 32.6
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 1.4e-06 57.4 186 26.3
PSO017G5932 Papaver somniferum HOM05D047867 ORTHO05D050185 3.2e-06 56.2 190 27.9


User provided reference genes

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