Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27917 Nelumbo nucifera HOM05D000344 ORTHO05D273174 4.7e-70 267.7 132 100.0
TAR376G0948 Trochodendron aralioides HOM05D000344 ORTHO05D000934 6.9e-29 131.0 136 54.4
Nn1g05539 Nelumbo nucifera HOM05D000344 ORTHO05D000934 8.5e-27 124.0 133 53.4
TAR628G1265 Trochodendron aralioides HOM05D000344 ORTHO05D000934 1.4e-26 123.2 136 52.9
TAR625G1132 Trochodendron aralioides HOM05D000344 ORTHO05D000934 3.2e-26 122.1 136 52.9
TAR381G0148 Trochodendron aralioides HOM05D000344 ORTHO05D000934 9.7e-23 110.5 136 50.0
Aqoxy5G01314 Aquilegia oxysepala HOM05D000344 ORTHO05D000934 3.6e-17 92.0 136 44.9
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 2.9e-11 72.4 137 37.2
Manes.12G127400 Manihot esculenta HOM05D000344 ORTHO05D000934 4.2e-10 68.6 93 41.9
Aqoxy6G01449 Aquilegia oxysepala HOM05D000344 ORTHO05D000934 7.2e-10 67.8 137 38.7
Thecc.01G092000 Theobroma cacao HOM05D000344 ORTHO05D000934 2.7e-09 65.9 139 36.0
CANSAT25G0490 Cannabis sativa HOM05D000344 ORTHO05D000934 1.8e-08 63.2 110 44.5
Atru.chr13.1030 Acer truncatum HOM05D000344 ORTHO05D000934 4.0e-08 62.0 77 51.9
Eucgr.F00414 Eucalyptus grandis HOM05D000344 ORTHO05D000934 4.0e-08 62.0 128 39.8
Psat5g046280 Pisum sativum HOM05D000344 ORTHO05D000934 1.2e-07 60.5 54 66.7
QL09p017563 Quercus lobata HOM05D000344 ORTHO05D000934 1.2e-07 60.5 130 37.7
TPR.G26069 Trifolium pratense HOM05D000344 ORTHO05D000934 1.2e-07 60.5 96 45.8
Cpa.g.sc55.46 Carica papaya HOM05D000344 ORTHO05D000934 1.5e-07 60.1 123 34.1
Duzib187G1585 Durio zibethinus HOM05D000344 ORTHO05D000934 1.5e-07 60.1 134 33.6
Cfa013689 Carpinus fangiana HOM05D000344 ORTHO05D000934 2.0e-07 59.7 121 38.8
Lalb_Chr08g0242461 Lupinus albus HOM05D000344 ORTHO05D000934 2.0e-07 59.7 69 55.1
Lj1g0002541 Lotus japonicus HOM05D000344 ORTHO05D000934 2.6e-07 59.3 106 42.5
Glyma.04G091700 Glycine max HOM05D000344 ORTHO05D000934 3.3e-07 58.9 54 64.8
Ca_15995_v3 Cicer arietinum L. HOM05D000344 ORTHO05D000934 4.4e-07 58.5 78 51.3
Ca_15996_v3 Cicer arietinum L. HOM05D000344 ORTHO05D000934 4.4e-07 58.5 78 51.3
Medtr3g100480 Medicago truncatula HOM05D000344 ORTHO05D000934 7.5e-07 57.8 127 38.6
TWI77G0270 Tripterygium wilfordii HOM05D000344 ORTHO05D000934 7.5e-07 57.8 133 33.1
CiPaw.08G054800 Carya illinoinensis HOM05D000344 ORTHO05D000934 9.7e-07 57.4 65 47.7
Gohir.D03G042600 Gossypium hirsutum HOM05D000344 ORTHO05D000934 9.7e-07 57.4 52 55.8
RcHm_v2.0_Chr2g0111521 Rosa chinensis HOM05D000344 ORTHO05D000934 9.7e-07 57.4 133 38.3
Gohir.A02G131200 Gossypium hirsutum HOM05D000344 ORTHO05D000934 1.3e-06 57.0 52 55.8
Haze_22330 Corylus avellana HOM05D000344 ORTHO05D000934 2.2e-06 56.2 53 60.4
FAN19G0831 Fragaria x ananassa HOM05D000344 ORTHO05D000934 3.7e-06 55.5 82 46.3
Prupe.6G197100 Prunus persica HOM05D000344 ORTHO05D000934 3.7e-06 55.5 119 37.0
FAN23G1067 Fragaria x ananassa HOM05D000344 ORTHO05D000934 4.8e-06 55.1 82 46.3
FAN28G1823 Fragaria x ananassa HOM05D000344 ORTHO05D000934 4.8e-06 55.1 82 46.3
Gorai.003G043300 Gossypium raimondii HOM05D000344 ORTHO05D000934 6.3e-06 54.7 52 53.8
PSO675G3981 Papaver somniferum HOM05D000344 ORTHO05D000934 6.3e-06 54.7 130 36.9
Thecc.08G069400 Theobroma cacao HOM05D000344 ORTHO05D000934 6.3e-06 54.7 54 61.1
Gohir.A02G078600 Gossypium hirsutum HOM05D000344 ORTHO05D000934 8.2e-06 54.3 72 50.0
Gorai.005G096600 Gossypium raimondii HOM05D000344 ORTHO05D000934 8.2e-06 54.3 72 50.0
VMungo1309G2925 Vigna mungo HOM05D000344 ORTHO05D000934 8.2e-06 54.3 54 61.1


User provided reference genes

Program Settings