Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27558 Nelumbo nucifera HOM05D004446 ORTHO05D005346 6.6e-87 323.9 157 100.0
TAR633G2153 Trochodendron aralioides HOM05D004446 ORTHO05D005346 1.4e-76 289.7 147 93.9
Nn2g14612 Nelumbo nucifera HOM05D004446 ORTHO05D005346 3.1e-76 288.5 144 95.1
TAR365G0553 Trochodendron aralioides HOM05D004446 ORTHO05D005346 1.5e-75 286.2 144 95.1
CDE04G3627 Ceratophyllum demersum HOM05D004446 ORTHO05D005346 1.7e-74 282.7 144 92.4
TAR362G0142 Trochodendron aralioides HOM05D004446 ORTHO05D005346 3.8e-74 281.6 144 93.1
HanXRQChr06g0183261 Helianthus annuus HOM05D004446 ORTHO05D005346 7.1e-73 277.3 144 90.3
HanXRQChr14g0434271 Helianthus annuus HOM05D004446 ORTHO05D005346 9.3e-73 276.9 144 89.6
ECA238G1521 Erigeron canadensis HOM05D004446 ORTHO05D005346 2.7e-72 275.4 153 85.0
Hund19262 Selenicereus undatus HOM05D004446 ORTHO05D005346 3.5e-72 275.0 144 87.5
Aqoxy3G02680 Aquilegia oxysepala HOM05D004446 ORTHO05D005346 4.6e-72 274.6 144 89.6
MSTRG.24643 Avicennia marina HOM05D004446 ORTHO05D005346 4.6e-72 274.6 144 89.6
CSS0043422 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 1.8e-71 272.7 144 88.2
CSS0044163 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 1.8e-71 272.7 144 88.2
DCAR_027363 Daucus carota HOM05D004446 ORTHO05D005346 1.8e-71 272.7 144 88.2
Lsat_1_v5_gn_2_41880 Lactuca sativa HOM05D004446 ORTHO05D005346 2.3e-71 272.3 143 88.8
Actinidia35938 Actinidia chinensis HOM05D004446 ORTHO05D005346 5.1e-71 271.2 144 86.1
HPP92_008960 Vanilla planifolia HOM05D004446 ORTHO05D005346 5.1e-71 271.2 144 88.2
vmacro00521 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 6.7e-71 270.8 144 86.8
ClCG06G007390 Citrullus lanatus HOM05D004446 ORTHO05D005346 4.3e-70 268.1 144 86.8
CsaV3_2G012290 Cucumis sativus L. HOM05D004446 ORTHO05D005346 4.3e-70 268.1 144 86.8
PSO782G0825 Papaver somniferum HOM05D004446 ORTHO05D005346 4.3e-70 268.1 144 88.2
Sc19g0005800 Simmondsia chinensis HOM05D004446 ORTHO05D005346 4.3e-70 268.1 144 86.1
CiPaw.02G127900 Carya illinoinensis HOM05D004446 ORTHO05D005346 5.6e-70 267.7 144 85.4
AUR62035332 Chenopodium quinoa HOM05D004446 ORTHO05D005346 5.6e-70 267.7 144 85.4
MELO3C023063.2 Cucumis melo HOM05D004446 ORTHO05D005346 5.6e-70 267.7 144 86.8
Eucgr.H02865 Eucalyptus grandis HOM05D004446 ORTHO05D005346 7.4e-70 267.3 144 86.8
SGA_v2.0_scaffold155G37240 Striga asiatica HOM05D004446 ORTHO05D005346 7.4e-70 267.3 144 87.5
Atru.chr4.1819 Acer truncatum HOM05D004446 ORTHO05D005346 9.6e-70 266.9 144 85.4
EL10Ac3g06748 Beta vulgaris HOM05D004446 ORTHO05D005346 9.6e-70 266.9 144 86.1
Nitab4.5_0000451g0180 Nicotiana tabacum HOM05D004446 ORTHO05D005346 1.3e-69 266.5 144 88.2
Nitab4.5_0018759g0010 Nicotiana tabacum HOM05D004446 ORTHO05D005346 1.3e-69 266.5 144 88.2
Rhsim09G0047000 Rhododendron simsii HOM05D004446 ORTHO05D005346 1.6e-69 266.2 151 84.8
RhsimUnG0181300 Rhododendron simsii HOM05D004446 ORTHO05D005346 1.6e-69 266.2 151 84.8
Ciclev10006172m.g Citrus clementina HOM05D004446 ORTHO05D005346 2.1e-69 265.8 144 86.1
Lsat_1_v5_gn_2_41141 Lactuca sativa HOM05D004446 ORTHO05D005346 2.1e-69 265.8 141 88.7
Manes.03G155100 Manihot esculenta HOM05D004446 ORTHO05D005346 2.1e-69 265.8 144 86.1
Peaxi162Scf00047g01619 Petunia axillaris HOM05D004446 ORTHO05D005346 2.1e-69 265.8 144 87.5
Manes.15G048500 Manihot esculenta HOM05D004446 ORTHO05D005346 2.8e-69 265.4 144 85.4
RcHm_v2.0_Chr4g0396561 Rosa chinensis HOM05D004446 ORTHO05D005346 2.8e-69 265.4 144 85.4
SalBow2G1310 Salvia bowleyana HOM05D004446 ORTHO05D005346 2.8e-69 265.4 144 85.4
Sed0017441 Sechium edule HOM05D004446 ORTHO05D005346 2.8e-69 265.4 144 85.4
Glyma.20G079400 Glycine max HOM05D004446 ORTHO05D005346 3.7e-69 265.0 144 85.4
PSO063G0015 Papaver somniferum HOM05D004446 ORTHO05D005346 3.7e-69 265.0 144 87.5
CANSAT78G0709 Cannabis sativa HOM05D004446 ORTHO05D005346 4.8e-69 264.6 144 86.1
COL.COLO4_05729 Corchorus olitorius HOM05D004446 ORTHO05D005346 4.8e-69 264.6 144 86.1
PGR044G1212 Punica granatum HOM05D004446 ORTHO05D005346 4.8e-69 264.6 144 86.1
arahy.Tifrunner.gnm1.ann1.VC13RQ Arachis hypogaea HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 84.7
Cpa.g.sc59.66 Carica papaya HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 85.4
FvH4_4g05410 Fragaria vesca HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 84.7
FAN07G2016 Fragaria x ananassa HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 84.7
FAN12G2493 Fragaria x ananassa HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 84.7
FAN12G4338 Fragaria x ananassa HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 84.7
Solyc09g091170.4 Solanum lycopersicum HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 86.8
Sopen09g034140 Solanum pennellii HOM05D004446 ORTHO05D005346 6.2e-69 264.2 144 86.8
ATR0736G077 Amborella trichopoda HOM05D004446 ORTHO05D005346 1.1e-68 263.5 145 84.8
Thecc.04G215500 Theobroma cacao HOM05D004446 ORTHO05D005346 1.1e-68 263.5 144 85.4
CiPaw.01G206200 Carya illinoinensis HOM05D004446 ORTHO05D005346 1.8e-68 262.7 144 84.7
Cc00_g09360 Coffea canephora HOM05D004446 ORTHO05D005346 1.8e-68 262.7 144 85.4
Lj6g0002383 Lotus japonicus HOM05D004446 ORTHO05D005346 2.4e-68 262.3 144 84.0
Potri.001G054500 Populus trichocarpa HOM05D004446 ORTHO05D005346 2.4e-68 262.3 144 84.7
PGSC0003DMG400011587 Solanum tuberosum HOM05D004446 ORTHO05D005346 2.4e-68 262.3 144 86.8
Zm00001eb008370 Zea mays HOM05D004446 ORTHO05D005346 3.1e-68 261.9 144 84.0
Gorai.011G163300 Gossypium raimondii HOM05D004446 ORTHO05D005346 4.0e-68 261.5 144 84.0
Gohir.A10G120100 Gossypium hirsutum HOM05D004446 ORTHO05D005346 5.3e-68 261.2 144 84.7
Gohir.D10G146300 Gossypium hirsutum HOM05D004446 ORTHO05D005346 5.3e-68 261.2 144 84.7
Gorai.011G163400 Gossypium raimondii HOM05D004446 ORTHO05D005346 5.3e-68 261.2 144 84.7
VMungo0720G0669 Vigna mungo HOM05D004446 ORTHO05D005346 5.3e-68 261.2 155 81.9
Glyma.10G128100 Glycine max HOM05D004446 ORTHO05D005346 6.9e-68 260.8 144 84.0
THA.LOC104826105 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 6.9e-68 260.8 144 84.7
TWI73G1246 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 6.9e-68 260.8 144 84.0
Gohir.A10G120200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 9.0e-68 260.4 144 83.3
Medtr1g046380 Medicago truncatula HOM05D004446 ORTHO05D005346 9.0e-68 260.4 144 84.7
Gohir.D10G146200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 1.2e-67 260.0 144 83.3
MD13G1228700 Malus domestica HOM05D004446 ORTHO05D005346 1.2e-67 260.0 144 83.3
Potri.003G173800 Populus trichocarpa HOM05D004446 ORTHO05D005346 1.2e-67 260.0 144 82.6
THA.LOC104816014 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 1.2e-67 260.0 144 84.7
TPR.G23640 Trifolium pratense HOM05D004446 ORTHO05D005346 1.2e-67 260.0 144 84.7
Phvul.007G238600 Phaseolus vulgaris HOM05D004446 ORTHO05D005346 1.5e-67 259.6 144 83.3
Lalb_Chr01g0011251 Lupinus albus HOM05D004446 ORTHO05D005346 2.0e-67 259.2 144 81.2
MD16G1234000 Malus domestica HOM05D004446 ORTHO05D005346 2.0e-67 259.2 144 82.6
Psat6g109720 Pisum sativum HOM05D004446 ORTHO05D005346 2.0e-67 259.2 144 84.0
arahy.Tifrunner.gnm1.ann1.Q5T5LU Arachis hypogaea HOM05D004446 ORTHO05D005346 2.6e-67 258.8 142 83.8
Aa31LG1G20240 Aethionema arabicum HOM05D004446 ORTHO05D005346 3.4e-67 258.5 144 83.3
CARHR127230 Cardamine hirsuta HOM05D004446 ORTHO05D005346 3.4e-67 258.5 144 84.7
Aa31LG5G4110 Aethionema arabicum HOM05D004446 ORTHO05D005346 4.5e-67 258.1 144 83.3
AL4G28840 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 4.5e-67 258.1 144 84.7
Duzib212G0284 Durio zibethinus HOM05D004446 ORTHO05D005346 4.5e-67 258.1 144 82.6
Thhalv10009042m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 4.5e-67 258.1 144 84.0
Ca_11789_v3 Cicer arietinum L. HOM05D004446 ORTHO05D005346 5.8e-67 257.7 144 83.3
Lalb_Chr03g0036811 Lupinus albus HOM05D004446 ORTHO05D005346 5.8e-67 257.7 144 81.9
Prupe.1G056200 Prunus persica HOM05D004446 ORTHO05D005346 5.8e-67 257.7 144 82.6
AL1G14310 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
BcaC07g36901 Brassica carinata HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
A08p36850 Brassica napus HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
A09p67770 Brassica napus HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
A10p03060 Brassica napus HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
C05p02820 Brassica napus HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
C08p01220 Brassica napus HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
BolC5t29065H Brassica oleracea HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
BolC8t46930H Brassica oleracea HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
BraA08t35586Z Brassica rapa HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
BraA09t42108Z Brassica rapa HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
BraA10t42579Z Brassica rapa HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
Thhalv10017386m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
Sp1g03460 Schrenkiella parvula HOM05D004446 ORTHO05D005346 1.0e-66 256.9 144 84.0
TWI09G0335 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 1.7e-66 256.1 144 82.6
BcaB03g13480 Brassica carinata HOM05D004446 ORTHO05D005346 2.2e-66 255.8 144 83.3
CARHR003980 Cardamine hirsuta HOM05D004446 ORTHO05D005346 2.2e-66 255.8 144 83.3
Sp4g15520 Schrenkiella parvula HOM05D004446 ORTHO05D005346 2.2e-66 255.8 144 82.6
vmacro22557 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 2.2e-66 255.8 157 78.3
Carub.0004s1468 Capsella rubella HOM05D004446 ORTHO05D005346 3.8e-66 255.0 144 84.0
Zm00001eb401250 Zea mays HOM05D004446 ORTHO05D005346 6.5e-66 254.2 144 81.2
AT1G04630 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 8.4e-66 253.8 144 82.6
AT2G33220 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 8.4e-66 253.8 142 84.5
Carub.0001s0386 Capsella rubella HOM05D004446 ORTHO05D005346 8.4e-66 253.8 144 82.6
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 1.1e-65 253.4 135 87.4
Migut.G00605 Erythranthe guttata HOM05D004446 ORTHO05D005346 3.2e-65 251.9 144 84.0
AUR62035909 Chenopodium quinoa HOM05D004446 ORTHO05D005346 2.1e-64 249.2 135 85.9
Hma1.2p1_2329F.1_g320020 Hydrangea macrophylla HOM05D004446 ORTHO05D005346 7.9e-64 247.3 175 69.7
QL06p022604 Quercus lobata HOM05D004446 ORTHO05D005346 1.3e-63 246.5 143 78.3
Os03g0192400 Oryza sativa ssp. japonica HOM05D004446 ORTHO05D005346 8.2e-61 237.3 139 79.9
SEGI_11387 Sequoiadendron giganteum HOM05D004446 ORTHO05D005346 1.3e-58 229.9 144 72.2
Actinidia25089 Actinidia chinensis HOM05D004446 ORTHO05D005346 8.5e-58 227.3 177 63.8
BcaC07g42166 Brassica carinata HOM05D004446 ORTHO05D005346 3.6e-56 221.9 144 76.4
Ah.13g075110 Amaranthus hybridus HOM05D004446 ORTHO05D005346 6.7e-55 217.6 144 72.2
Sabra03G0127300 Salix brachista HOM05D004446 ORTHO05D005346 6.3e-53 211.1 260 45.8
AagrBONN_evm.TU.Sc2ySwM_344.5082 Anthoceros agrestis HOM05D004446 ORTHO05D005346 1.7e-50 203.0 144 66.7
Pp3c5_4240 Physcomitrium patens HOM05D004446 ORTHO05D005346 5.5e-49 198.0 141 66.0
Sabra01G0039000 Salix brachista HOM05D004446 ORTHO05D005346 1.6e-48 196.4 308 39.9
BolC3t14561H Brassica oleracea HOM05D004446 ORTHO05D005346 2.1e-48 196.1 140 71.4
Pp3c16_2570 Physcomitrium patens HOM05D004446 ORTHO05D005346 4.6e-48 194.9 141 66.7
BolC8t52743H Brassica oleracea HOM05D004446 ORTHO05D005346 1.5e-46 189.9 117 80.3
Mapoly0001s0090 Marchantia polymorpha HOM05D004446 ORTHO05D005346 2.0e-46 189.5 142 63.4
unitig_748.g8289 Utricularia gibba HOM05D002765 ORTHO05D003083 3.7e-45 185.3 142 66.2
CBR_g9031 Chara braunii HOM05D004446 ORTHO05D005346 2.4e-44 182.6 138 62.3
Dinv27149 Davidia involucrata HOM05D004446 ORTHO05D005346 7.4e-38 161.0 82 89.0
GSVIVG01028486001 Vitis vinifera HOM05D004446 ORTHO05D005346 3.7e-37 158.7 84 86.9
C08p52100 Brassica napus HOM05D004446 ORTHO05D005346 9.1e-36 154.1 93 77.4
MCO16G128 Micromonas commoda HOM05D004446 ORTHO05D005346 1.3e-34 150.2 142 52.8
CAN.G1588.2 Capsicum annuum HOM05D004446 ORTHO05D005346 4.2e-33 145.2 75 89.3
RhsimUnG0181500 Rhododendron simsii HOM05D004446 ORTHO05D005346 7.2e-33 144.4 75 86.7
Oeu008823.1 Olea europaea HOM05D004446 ORTHO05D005346 1.6e-32 143.3 71 91.5
Haze_11535 Corylus avellana HOM05D004446 ORTHO05D005346 1.2e-30 137.1 88 71.6
A03p18650 Brassica napus HOM05D004446 ORTHO05D005346 2.0e-30 136.3 73 84.9
BraA03t11124Z Brassica rapa HOM05D004446 ORTHO05D005346 2.0e-30 136.3 73 84.9
SMO364G0175 Selaginella moellendorffii HOM05D004446 ORTHO05D005346 3.1e-28 129.0 143 48.3
MBI10_g44933_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 5.3e-28 128.3 63 95.2
BcaC01g05851 Brassica carinata HOM05D004446 ORTHO05D005346 5.0e-26 121.7 66 86.4
Cre16.g664600 Chlamydomonas reinhardtii HOM05D004446 ORTHO05D005346 5.0e-26 121.7 133 45.1
MBI10_g35300_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 1.1e-25 120.6 154 49.4
Zm00001eb305890 Zea mays HOM05D004446 ORTHO05D005346 4.2e-25 118.6 70 74.3
Oeu008826.1 Olea europaea HOM05D004446 ORTHO05D005346 3.0e-23 112.5 65 78.5
Cc05_g03600 Coffea canephora HOM05D004446 ORTHO05D005346 2.2e-21 106.3 74 73.0
SHI08306 Sapria himalayana HOM05D004446 ORTHO05D005346 3.4e-14 82.4 63 60.3
C03p21790 Brassica napus HOM05D004446 ORTHO05D005346 1.1e-12 77.4 46 80.4
SHI22881 Sapria himalayana HOM05D004446 ORTHO05D005346 2.7e-11 72.8 56 64.3
PRCOL_00006069 Prasinoderma coloniale HOM05D004446 ORTHO05D005346 7.8e-11 71.2 99 38.4
CSS0009466 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-07 59.3 30 80.0


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