Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 3.3e-164 581.6 295 100.0
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 3.1e-122 442.2 294 77.6
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 1.1e-119 433.7 295 76.6
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 4.9e-115 418.3 297 75.1
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.5e-111 406.8 295 72.9
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.1e-110 402.9 264 79.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 2.8e-110 402.5 272 77.9
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.1e-110 401.4 273 77.7
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 5.2e-109 398.3 303 71.3
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 5.8e-108 394.8 255 78.4
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 9.8e-108 394.0 241 80.5
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.3e-107 393.7 300 70.7
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 2.9e-107 392.5 298 71.1
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 2.9e-107 392.5 244 80.7
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 6.4e-107 391.3 242 80.6
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.1e-106 390.6 245 80.0
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.9e-106 389.8 295 70.5
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.4e-106 389.4 254 77.2
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.1e-106 388.7 297 70.0
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 5.4e-106 388.3 300 70.3
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 5.4e-106 388.3 243 79.0
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 9.2e-106 387.5 300 70.0
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 9.2e-106 387.5 243 78.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.2e-105 387.1 282 72.3
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.7e-105 386.0 241 79.7
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 6.0e-105 384.8 243 79.0
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.0e-104 384.0 263 74.5
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.3e-104 383.6 296 69.3
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.7e-104 383.3 301 68.8
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.3e-104 382.9 298 68.8
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.9e-104 382.1 296 69.9
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 6.6e-104 381.3 296 68.2
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.6e-104 381.3 300 69.3
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 6.6e-104 381.3 245 79.2
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.9e-103 379.8 242 78.1
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.5e-103 379.4 269 71.7
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 7.3e-103 377.9 244 77.0
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 7.3e-103 377.9 297 69.7
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 9.5e-103 377.5 237 79.7
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 1.2e-102 377.1 296 67.6
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 3.6e-102 375.6 243 76.5
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.6e-102 375.6 298 67.1
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 4.7e-102 375.2 295 68.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 6.2e-102 374.8 242 76.4
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.1e-101 374.0 250 74.4
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.4e-101 373.6 239 79.1
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 4.0e-101 372.1 247 76.1
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 4.0e-101 372.1 295 67.8
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 6.8e-101 371.3 240 80.0
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 8.9e-101 370.9 244 76.2
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.2e-100 370.5 280 69.6
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 2.0e-100 369.8 236 78.4
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 2.6e-100 369.4 298 68.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 3.4e-100 369.0 247 74.9
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 3.4e-100 369.0 280 71.8
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 5.8e-100 368.2 242 74.4
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 5.8e-100 368.2 244 75.4
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 5.8e-100 368.2 298 68.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 7.5e-100 367.9 298 68.1
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 9.8e-100 367.5 314 62.7
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.7e-99 366.7 296 67.6
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 2.2e-99 366.3 217 82.9
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.9e-99 365.9 247 74.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 3.7e-99 365.5 295 65.8
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 4.9e-99 365.2 300 64.3
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 1.4e-98 363.6 266 70.7
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 2.4e-98 362.8 307 64.2
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 4.1e-98 362.1 273 70.0
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 7.0e-98 361.3 242 73.1
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 9.2e-98 360.9 244 74.6
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.6e-97 360.1 294 66.0
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.1e-97 359.8 246 74.0
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.1e-97 359.8 270 70.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 4.6e-97 358.6 253 70.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 6.0e-97 358.2 299 65.2
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 6.0e-97 358.2 299 65.2
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 6.0e-97 358.2 343 58.9
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.0e-96 357.5 297 66.0
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.0e-96 355.9 246 73.6
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 3.0e-96 355.9 257 70.8
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 3.9e-96 355.5 246 72.4
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 3.9e-96 355.5 300 64.7
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 3.9e-96 355.5 300 64.7
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 5.1e-96 355.1 245 73.1
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 6.6e-96 354.8 246 73.2
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 6.6e-96 354.8 238 76.1
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.9e-95 353.2 301 63.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.9e-95 353.2 300 66.0
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.9e-95 353.2 250 72.4
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.3e-95 352.4 301 63.8
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.8e-94 349.4 241 73.9
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.8e-94 349.4 241 73.9
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.6e-94 349.0 241 73.9
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 3.6e-94 349.0 290 65.5
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.4e-93 347.1 286 66.4
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 5.2e-93 345.1 253 69.2
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 7.1e-90 334.7 217 77.9
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.8e-86 322.8 243 67.1
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.3e-79 298.9 253 65.2
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.6e-79 298.5 203 76.4
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.2e-78 297.4 242 65.3
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.6e-72 275.0 211 61.6
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.9e-71 273.5 275 53.8
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.3e-70 270.8 216 67.1
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 4.0e-69 265.8 208 61.1
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.6e-68 263.1 226 64.2
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.2e-67 260.0 181 72.4
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.6e-65 253.8 216 60.6
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 6.5e-43 178.7 312 41.0
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.7e-35 154.1 149 58.4
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.7e-33 146.7 95 77.9
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 3.7e-30 136.3 197 41.1
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 4.8e-30 136.0 208 37.5
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 5.3e-29 132.5 98 68.4
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 4.5e-28 129.4 93 73.1
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 7.7e-28 128.6 130 50.0
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 8.5e-27 125.2 167 40.1
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.5e-10 70.5 100 48.0


User provided reference genes

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