Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27267 Nelumbo nucifera HOM05D000014 ORTHO05D000016 5.5e-65 250.8 120 100.0
CANSAT80G2515 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-33 146.4 122 55.7
Oeu010813.1 Olea europaea HOM05D000014 ORTHO05D000016 1.9e-33 146.0 124 55.6
CANSAT54G2497 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-31 138.3 108 58.3
Oeu054782.1 Olea europaea HOM05D000014 ORTHO05D000016 8.8e-31 137.1 119 56.3
CANSAT56G4502 Cannabis sativa HOM05D000014 ORTHO05D000016 7.4e-30 134.0 118 52.5
CANSAT78G0058 Cannabis sativa HOM05D000014 ORTHO05D000016 4.8e-29 131.3 120 49.2
CANSAT21G0085 Cannabis sativa HOM05D000014 ORTHO05D000016 8.2e-29 130.6 120 49.2
CANSAT01G2491 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-28 130.2 120 49.2
CANSAT80G0973 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-28 130.2 120 49.2
CANSAT11G0489 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-28 129.8 120 49.2
CANSAT11G2114 Cannabis sativa HOM05D000014 ORTHO05D000016 2.4e-28 129.0 120 50.0
CANSAT21G1648 Cannabis sativa HOM05D000014 ORTHO05D000016 9.1e-28 127.1 120 48.3
CANSAT21G1360 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-24 115.2 111 48.6
CANSAT21G1378 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-21 105.1 115 44.3
CANSAT21G1939 Cannabis sativa HOM05D000014 ORTHO05D000016 7.7e-19 97.4 120 41.7
CANSAT01G2631 Cannabis sativa HOM05D000014 ORTHO05D000016 1.9e-17 92.8 87 51.7
CANSAT80G0204 Cannabis sativa HOM05D000014 ORTHO05D000016 4.4e-14 81.6 112 38.4
PSO713G0020 Papaver somniferum HOM05D000014 ORTHO05D000016 1.4e-12 76.6 125 34.4
CANSAT11G1237 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-12 76.3 74 45.9
CANSAT64G1241 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-12 76.3 87 48.3
RcHm_v2.0_Chr1g0320831 Rosa chinensis HOM05D000014 ORTHO05D000093 3.1e-12 75.5 125 36.8
Oeu014137.1 Olea europaea HOM05D000014 ORTHO05D000016 1.6e-11 73.2 122 31.1
PSO161G0113 Papaver somniferum HOM05D000014 ORTHO05D000016 2.7e-11 72.4 125 32.0
PSO017G4520 Papaver somniferum HOM05D000014 ORTHO05D000016 4.5e-11 71.6 125 32.8
PSO063G4150 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-10 69.7 124 31.5
Oeu019655.1 Olea europaea HOM05D000014 ORTHO05D000016 3.8e-10 68.6 43 69.8
PSO478G4299 Papaver somniferum HOM05D000014 ORTHO05D000016 9.5e-09 63.9 126 29.4
Actinidia20861 Actinidia chinensis HOM05D000014 ORTHO05D000093 4.7e-08 61.6 120 31.7
Actinidia22454 Actinidia chinensis HOM05D000014 ORTHO05D000016 4.7e-08 61.6 120 31.7
ATR0485G001 Amborella trichopoda HOM05D000014 ORTHO05D000016 2.3e-07 59.3 76 40.8
Gohir.D06G120166 Gossypium hirsutum HOM05D000014 ORTHO05D000016 8.9e-07 57.4 90 33.3
Gorai.010G138200 Gossypium raimondii HOM05D000014 ORTHO05D000016 1.5e-06 56.6 93 33.3
PSO478G3785 Papaver somniferum HOM05D000014 ORTHO05D000016 2.0e-06 56.2 121 28.9
PSO478G0441 Papaver somniferum HOM05D000014 ORTHO05D000016 3.4e-06 55.5 120 30.0
QL07p002117 Quercus lobata HOM05D000014 ORTHO05D000016 5.7e-06 54.7 122 30.3
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 5.7e-06 54.7 125 29.6
FAN19G0137 Fragaria x ananassa HOM05D001634 ORTHO05D001521 9.8e-06 53.9 67 41.8


User provided reference genes

Program Settings