Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 7.5e-192 673.7 343 100.0
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 5.6e-139 498.0 343 77.8
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.2e-136 490.3 342 76.3
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.4e-134 483.4 351 74.6
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 3.5e-133 478.8 333 75.4
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.0e-132 477.2 343 74.6
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 3.0e-132 475.7 325 76.0
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.9e-132 475.3 343 73.8
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 3.3e-131 472.2 296 80.7
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.3e-130 470.3 339 73.2
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.1e-130 469.5 334 72.5
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.1e-130 469.5 342 73.4
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.8e-130 469.2 313 76.7
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 2.8e-130 469.2 338 74.6
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.8e-130 469.2 340 72.4
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 4.8e-130 468.4 334 72.5
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 4.0e-129 465.3 312 76.9
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 5.3e-129 464.9 336 73.2
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 6.9e-129 464.5 315 76.5
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.2e-128 463.8 331 71.6
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.2e-128 463.8 300 79.3
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.6e-128 462.6 330 74.2
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 3.4e-128 462.2 339 72.0
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 3.4e-128 462.2 312 75.3
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 5.8e-128 461.5 278 83.5
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 5.8e-128 461.5 332 72.3
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 1.7e-127 459.9 341 71.8
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.2e-127 459.5 296 79.4
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 3.8e-127 458.8 312 75.6
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.8e-127 458.8 334 71.9
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.8e-127 458.8 346 71.7
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 6.4e-127 458.0 299 77.6
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.9e-126 456.4 332 71.4
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.9e-126 456.4 346 70.5
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.4e-126 456.1 345 71.0
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 3.2e-126 455.7 336 71.4
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.2e-126 455.7 345 71.3
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 5.4e-126 454.9 324 72.8
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 7.1e-126 454.5 341 71.0
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.1e-125 453.0 395 64.8
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 6.0e-125 451.4 333 71.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 6.0e-125 451.4 347 69.2
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 7.9e-125 451.1 330 69.7
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 1.3e-124 450.3 307 75.6
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-124 450.3 297 76.8
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 2.3e-124 449.5 329 72.9
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.3e-124 449.5 331 69.8
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 3.9e-124 448.7 275 81.8
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 3.9e-124 448.7 275 81.8
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.1e-123 447.2 318 72.6
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.5e-123 446.8 307 74.3
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.5e-123 446.8 296 77.0
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.5e-123 446.0 334 71.3
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.3e-123 445.7 330 70.6
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 4.3e-123 445.3 313 73.5
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 5.6e-123 444.9 304 76.0
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 7.4e-123 444.5 332 69.6
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.6e-122 443.4 336 70.8
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.6e-122 443.4 313 73.2
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 2.8e-122 442.6 316 71.5
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 4.8e-122 441.8 332 69.6
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 4.8e-122 441.8 250 86.0
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 6.2e-122 441.4 252 86.1
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 6.2e-122 441.4 293 77.1
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 8.1e-122 441.0 310 72.3
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.1e-121 440.7 343 68.8
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.4e-121 439.5 291 76.6
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 6.9e-121 438.0 254 83.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.2e-120 437.2 252 85.3
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 3.4e-120 435.6 332 69.3
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 3.4e-120 435.6 328 68.9
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 5.8e-120 434.9 274 78.1
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 5.8e-120 434.9 322 71.4
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 7.6e-120 434.5 332 69.9
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.8e-119 432.2 300 75.7
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 8.4e-119 431.0 277 78.3
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.9e-118 429.9 328 68.3
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 7.1e-118 427.9 274 78.8
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 7.1e-118 427.9 332 68.7
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 2.1e-117 426.4 316 69.9
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.1e-117 426.4 292 74.3
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.5e-115 420.2 297 72.7
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 4.3e-115 418.7 328 67.7
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.3e-114 417.2 250 80.8
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 2.8e-114 416.0 335 66.0
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 3.7e-114 415.6 329 67.8
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 4.8e-114 415.2 341 63.3
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 6.2e-114 414.8 299 71.9
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 6.2e-114 414.8 299 71.9
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 8.2e-114 414.5 299 71.9
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 8.2e-114 414.5 299 71.9
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.4e-112 409.1 294 72.4
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 3.4e-112 409.1 302 70.2
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 4.5e-112 408.7 298 71.5
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.5e-110 402.9 410 55.9
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 9.3e-110 401.0 250 77.6
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.2e-109 400.6 304 67.8
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.6e-109 400.2 279 72.8
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 2.7e-109 399.4 280 72.5
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 3.5e-109 399.1 257 75.9
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 7.4e-107 391.3 292 70.9
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 8.2e-106 387.9 277 71.1
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.2e-104 384.0 309 67.3
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 4.5e-104 382.1 242 79.3
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.4e-102 377.1 309 65.0
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 7.2e-102 374.8 344 61.9
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 3.3e-99 365.9 274 65.0
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.8e-97 360.1 348 60.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 4.1e-89 332.4 335 55.2
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 3.0e-84 316.2 288 56.2
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-82 310.8 236 68.2
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 2.2e-82 310.1 348 54.9
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 4.8e-82 308.9 321 56.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.7e-66 257.3 217 64.5
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.8e-66 255.8 215 66.5
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.4e-65 252.3 220 65.9
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.2e-64 251.1 213 65.7
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 9.5e-62 241.5 150 78.7
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.8e-60 237.3 268 45.9
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.7e-58 230.7 238 47.5
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 1.1e-57 228.0 236 48.7
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-57 227.3 128 87.5
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-57 227.3 128 87.5
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 6.6e-55 218.8 271 42.8
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 1.9e-54 217.2 217 55.8
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.0e-52 211.5 247 44.1
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 3.1e-52 209.9 170 66.5
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 3.1e-52 209.9 125 81.6
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 7.0e-49 198.7 109 87.2
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 3.2e-41 173.3 236 38.1
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 1.3e-39 167.9 247 38.1
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.7e-37 159.5 91 89.0
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.1e-33 148.3 100 74.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 4.6e-32 142.9 133 60.2
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 6.6e-31 139.0 215 34.4
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.8e-29 133.7 108 66.7
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.3e-26 124.8 93 68.8
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 5.4e-25 119.4 65 87.7
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 2.1e-24 117.5 65 86.2
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 4.6e-24 116.3 65 86.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 8.1e-21 105.5 99 60.6
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 8.1e-21 105.5 99 60.6
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 8.1e-21 105.5 99 60.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.8e-20 104.4 73 71.2
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 2.9e-18 97.1 84 63.1
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 1.9e-17 94.4 50 88.0
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 5.4e-17 92.8 154 39.0
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 7.1e-17 92.4 60 75.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 1.6e-16 91.3 52 84.6
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 3.3e-14 83.6 47 85.1
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.8e-13 79.7 160 38.8
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.9e-09 67.8 45 71.1
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 5.1e-07 59.7 59 61.0


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