Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27093 Nelumbo nucifera HOM05D009512 ORTHO05D010730 4.1e-71 271.6 163 100.0
Nn5g27090 Nelumbo nucifera HOM05D009512 ORTHO05D010730 4.1e-23 112.1 102 78.4
Phvul.002G141000 Phaseolus vulgaris HOM05D009512 ORTHO05D010730 4.0e-10 68.9 101 35.6
Glyma.09G205000 Glycine max HOM05D009512 ORTHO05D010730 1.5e-09 67.0 96 36.5
Glyma.01G018000 Glycine max HOM05D009512 ORTHO05D010730 5.8e-09 65.1 96 35.4
MD12G1166300 Malus domestica HOM05D009512 ORTHO05D010730 3.7e-08 62.4 33 69.7
Psat2g136400 Pisum sativum HOM05D009512 ORTHO05D010730 8.3e-08 61.2 111 29.7
TPR.G1037 Trifolium pratense HOM05D009512 ORTHO05D010730 1.1e-07 60.8 95 41.1
Sed0026474 Sechium edule HOM05D009512 ORTHO05D010730 4.1e-07 58.9 98 29.6
EL10Ac6g15177 Beta vulgaris HOM05D011998 ORTHO05D010730 5.4e-07 58.5 53 47.2
Prupe.5G034700 Prunus persica HOM05D009512 ORTHO05D010730 5.4e-07 58.5 101 32.7
QL12p005029 Quercus lobata HOM05D009512 ORTHO05D010730 7.1e-07 58.2 91 42.9
AUR62017995 Chenopodium quinoa HOM05D011998 ORTHO05D010730 9.2e-07 57.8 101 30.7
Ah.03g143310 Amaranthus hybridus HOM05D011998 ORTHO05D010730 1.2e-06 57.4 32 65.6
Lj2g0024897 Lotus japonicus HOM05D009512 ORTHO05D010730 1.6e-06 57.0 113 40.7
arahy.Tifrunner.gnm1.ann1.JQZ01T Arachis hypogaea HOM05D009512 ORTHO05D010730 3.5e-06 55.8 96 37.5
arahy.Tifrunner.gnm1.ann1.KKPN0I Arachis hypogaea HOM05D009512 ORTHO05D010730 3.5e-06 55.8 96 37.5
Manes.03G073600 Manihot esculenta HOM05D009512 ORTHO05D010730 3.5e-06 55.8 97 32.0
FAN26G2196 Fragaria x ananassa HOM05D000564 ORTHO05D005239 4.6e-06 55.5 43 48.8
AUR62017997 Chenopodium quinoa HOM05D011998 ORTHO05D010730 7.8e-06 54.7 43 48.8
Sc03g0000480 Simmondsia chinensis HOM05D011998 ORTHO05D010730 7.8e-06 54.7 112 27.7


User provided reference genes

Program Settings