Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 2.4e-157 559.3 396 100.0
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 3.5e-52 209.9 233 55.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 2.7e-44 183.7 395 48.6
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.5e-39 167.9 246 47.2
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 5.8e-39 166.0 242 48.3
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 1.7e-38 164.5 237 46.8
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 1.4e-37 161.4 242 45.5
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.9e-37 161.0 235 48.5
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 6.0e-36 156.0 227 47.6
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.0e-35 155.2 232 45.7
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 1.8e-35 154.5 249 45.8
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 3.9e-35 153.3 249 45.4
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 1.5e-34 151.4 239 45.2
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.9e-34 151.0 247 44.5
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.9e-34 151.0 247 44.5
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 4.3e-34 149.8 232 45.3
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 9.6e-34 148.7 222 45.9
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.6e-33 147.9 259 40.2
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 2.8e-33 147.1 250 45.2
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 4.8e-33 146.4 242 43.4
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.8e-33 146.4 232 45.7
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 6.2e-33 146.0 237 43.5
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 1.1e-32 145.2 266 42.9
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 1.1e-32 145.2 259 41.7
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.8e-32 144.4 247 44.1
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 6.9e-32 142.5 246 43.9
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 9.0e-32 142.1 239 43.5
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 1.2e-31 141.7 235 43.0
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 1.5e-31 141.4 222 45.5
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.5e-31 141.4 291 38.8
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 3.4e-31 140.2 230 45.2
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 3.4e-31 140.2 240 42.5
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 4.5e-31 139.8 239 43.1
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 1.3e-30 138.3 240 40.8
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 2.2e-30 137.5 255 43.9
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 3.8e-30 136.7 225 45.8
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 5.0e-30 136.3 219 44.7
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 6.5e-30 136.0 262 40.8
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 6.5e-30 136.0 260 40.0
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 8.4e-30 135.6 221 44.8
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 8.4e-30 135.6 260 40.0
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 4.2e-29 133.3 196 48.0
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 5.5e-29 132.9 230 43.5
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 7.1e-29 132.5 312 36.9
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 3.5e-28 130.2 247 42.1
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.3e-27 128.3 242 40.9
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.8e-27 127.9 243 42.8
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 8.7e-27 125.6 241 40.7
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.1e-26 125.2 203 44.3
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 1.5e-26 124.8 242 40.5
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 2.5e-26 124.0 256 40.6
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 4.3e-26 123.2 236 39.0
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 4.3e-26 123.2 242 41.7
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 7.4e-26 122.5 241 40.2
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 1.6e-25 121.3 194 45.4
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 1.6e-25 121.3 189 45.5
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 2.2e-25 120.9 239 41.4
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.1e-24 118.6 243 40.3
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 2.4e-24 117.5 237 40.9
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 4.1e-24 116.7 242 38.8
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 6.9e-24 115.9 238 37.4
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.2e-23 115.2 248 39.5
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 4.5e-23 113.2 213 39.4
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 1.0e-22 112.1 205 44.4
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 2.2e-22 110.9 240 36.7
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.4e-21 108.2 199 39.2
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 4.2e-21 106.7 228 39.5
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 7.2e-21 105.9 248 37.1
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 2.1e-20 104.4 224 37.5
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 2.7e-20 104.0 214 40.2
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.7e-20 104.0 235 34.9
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 7.9e-20 102.4 231 39.4
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.4e-19 101.7 224 37.9
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.4e-19 101.7 228 37.3
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.3e-19 100.9 375 29.9
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 3.0e-19 100.5 278 34.2
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 5.1e-19 99.8 192 41.7
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 6.7e-19 99.4 239 40.2
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 8.8e-19 99.0 210 39.5
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.3e-18 96.7 261 35.6
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 5.7e-18 96.3 252 31.7
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 9.7e-18 95.5 241 35.3
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 1.7e-17 94.7 228 35.5
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 1.7e-17 94.7 228 35.5
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 3.7e-17 93.6 231 35.1
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 6.3e-17 92.8 232 36.2
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 8.2e-17 92.4 180 40.6
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 1.1e-16 92.0 232 36.2
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 4.1e-16 90.1 180 40.6
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 4.1e-16 90.1 163 40.5
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 5.9e-15 86.3 264 31.8
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.3e-14 85.1 215 36.7
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 5.0e-14 83.2 177 37.9
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 3.2e-13 80.5 182 36.8
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.2e-13 80.1 259 33.2
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 1.2e-12 78.6 164 34.8
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 3.6e-12 77.0 244 30.7
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 2.3e-11 74.3 125 42.4
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.3e-11 74.3 234 33.8
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 3.0e-11 73.9 125 42.4
SEGI_40666 Sequoiadendron giganteum HOM05D006830 ORTHO05D008119 6.7e-11 72.8 309 27.8
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 1.1e-10 72.0 61 67.2
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.4e-08 64.3 84 46.4
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 4.1e-08 63.5 61 60.7
Aqoxy4G03294 Aquilegia oxysepala HOM05D006830 ORTHO05D008119 1.7e-06 58.2 118 37.3
TAR624G0244 Trochodendron aralioides HOM05D006830 ORTHO05D008119 3.8e-06 57.0 51 58.8
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 6.5e-06 56.2 104 41.3


User provided reference genes

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