Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 1.2e-244 849.4 425 100.0
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 2.4e-163 579.3 460 67.4
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 7.9e-143 511.1 459 60.6
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 2.4e-139 499.6 469 58.8
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 3.4e-138 495.7 458 59.6
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 2.9e-137 492.7 467 57.0
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 3.6e-135 485.7 497 55.1
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 3.0e-134 482.6 465 56.8
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 4.7e-127 458.8 457 55.6
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 1.4e-126 457.2 506 49.8
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 2.3e-126 456.4 462 55.0
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 5.2e-126 455.3 450 55.3
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 8.8e-126 454.5 476 52.5
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 1.2e-125 454.1 458 55.0
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 2.0e-125 453.4 460 53.9
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 2.0e-125 453.4 503 49.7
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 4.4e-125 452.2 501 50.5
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 5.7e-125 451.8 486 54.3
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 7.5e-125 451.4 501 50.3
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 2.8e-124 449.5 482 49.8
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 2.8e-124 449.5 466 54.3
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 4.8e-124 448.7 505 51.3
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.8e-123 446.8 505 50.1
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 4.1e-123 445.7 464 52.4
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 9.1e-123 444.5 462 51.5
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.6e-122 443.7 454 53.3
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 2.0e-122 443.4 502 50.0
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 4.5e-122 442.2 446 56.3
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 1.7e-121 440.3 453 54.3
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 5.0e-121 438.7 504 49.4
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 8.5e-121 438.0 438 54.1
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 8.5e-121 438.0 459 52.3
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 1.1e-120 437.6 470 50.6
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 2.5e-120 436.4 470 50.9
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 9.4e-120 434.5 504 48.4
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 2.1e-119 433.3 505 48.3
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 8.0e-119 431.4 404 57.9
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 8.0e-119 431.4 461 50.8
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 8.0e-119 431.4 442 53.4
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.0e-118 431.0 461 50.8
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 1.0e-118 431.0 489 51.3
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 1.4e-118 430.6 463 50.1
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 1.4e-118 430.6 471 51.0
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.4e-118 430.6 456 53.7
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 3.0e-118 429.5 466 53.9
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 4.0e-118 429.1 449 51.7
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 8.8e-118 427.9 456 53.7
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.2e-117 427.6 456 53.5
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.2e-117 427.6 461 50.5
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.5e-117 427.2 461 50.3
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 7.5e-117 424.9 453 51.7
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 7.5e-117 424.9 455 51.6
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 9.8e-117 424.5 461 49.7
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 1.3e-116 424.1 464 50.4
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 6.3e-116 421.8 455 52.7
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 3.1e-115 419.5 460 49.3
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 4.1e-115 419.1 445 53.5
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 4.5e-114 415.6 448 51.8
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 7.7e-114 414.8 460 50.7
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 1.7e-113 413.7 447 53.5
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 5.0e-113 412.1 446 51.6
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 6.6e-113 411.8 468 49.8
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 7.2e-112 408.3 444 52.5
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.2e-111 407.5 483 48.0
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 1.6e-111 407.1 464 49.1
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 2.1e-111 406.8 468 50.4
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 8.0e-111 404.8 455 51.2
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 1.0e-110 404.4 484 47.9
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 4.0e-110 402.5 520 47.7
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 5.2e-110 402.1 470 50.6
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 8.9e-110 401.4 445 51.2
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 3.7e-108 396.0 459 47.1
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 4.9e-108 395.6 441 49.9
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 4.9e-108 395.6 441 50.3
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 1.4e-107 394.0 443 50.3
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 1.4e-107 394.0 448 50.7
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 2.4e-107 393.3 444 50.5
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.0e-105 387.9 441 49.9
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 2.1e-103 380.2 476 49.2
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 3.6e-103 379.4 419 54.2
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 4.7e-103 379.0 405 49.4
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 2.0e-101 373.6 476 46.2
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 2.4e-99 366.7 444 48.4
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 1.2e-90 337.8 425 47.5
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 1.3e-89 334.3 423 46.8
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 3.3e-88 329.7 389 49.4
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 5.4e-83 312.4 398 49.7
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 5.4e-83 312.4 395 44.3
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 2.3e-81 307.0 424 44.8
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 2.3e-81 307.0 376 48.1
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.2e-77 294.7 339 51.0
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 1.5e-77 294.3 456 40.1
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.0e-73 281.6 439 40.8
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 4.3e-64 249.6 166 72.3
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 5.6e-64 249.2 339 43.7
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.5e-61 241.1 166 69.9
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 5.8e-61 239.2 313 46.0
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 2.2e-60 237.3 164 71.3
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 2.7e-58 230.3 162 69.8
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 2.3e-57 227.3 540 31.9
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 8.7e-57 225.3 505 33.9
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.3e-52 211.5 455 33.2
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 2.5e-51 207.2 124 80.6
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 4.3e-48 196.4 124 75.8
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 5.3e-46 189.5 263 40.7
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 6.9e-46 189.1 284 40.5
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 4.5e-45 186.4 241 46.1
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.3e-44 184.9 502 27.7
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 8.4e-44 182.2 206 50.5
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 3.1e-30 137.1 166 43.4
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 3.4e-29 133.7 143 53.1
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 2.1e-26 124.4 94 67.0
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 7.9e-26 122.5 69 78.3
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.2e-21 108.6 84 64.3
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 2.2e-15 87.8 45 86.7
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 3.7e-15 87.0 102 51.0
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.6e-13 81.6 149 36.2
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 7.7e-13 79.3 54 68.5
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 9.1e-06 55.8 166 31.3


User provided reference genes

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