Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26672 Nelumbo nucifera HOM05D000246 ORTHO05D009147 8.6e-126 453.8 244 100.0
MBI07_g10938_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D009147 1.2e-39 167.5 263 43.0
Dinv19568 Davidia involucrata HOM05D000246 ORTHO05D009147 4.9e-36 155.6 250 45.2
Manes.16G053100 Manihot esculenta HOM05D000246 ORTHO05D009147 1.2e-34 151.0 248 43.1
Cfa017778 Carpinus fangiana HOM05D000246 ORTHO05D009147 2.0e-34 150.2 266 41.4
CiPaw.15G110300 Carya illinoinensis HOM05D000246 ORTHO05D009147 2.5e-32 143.3 273 41.0
Ciclev10005602m.g Citrus clementina HOM05D000246 ORTHO05D009147 2.5e-32 143.3 265 40.8
Aqoxy6G02815 Aquilegia oxysepala HOM05D000246 ORTHO05D009147 9.5e-32 141.4 276 39.5
COL.COLO4_32273 Corchorus olitorius HOM05D000246 ORTHO05D009147 2.8e-31 139.8 246 40.7
Potri.010G176100 Populus trichocarpa HOM05D000246 ORTHO05D009147 3.6e-31 139.4 244 42.2
CSS0016646 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009147 8.0e-31 138.3 273 41.4
MD05G1241400 Malus domestica HOM05D000246 ORTHO05D009147 3.1e-30 136.3 278 38.8
Thecc.07G193000 Theobroma cacao HOM05D000246 ORTHO05D009147 5.2e-30 135.6 265 39.2
Gorai.004G255500 Gossypium raimondii HOM05D000246 ORTHO05D009147 6.8e-30 135.2 250 39.6
Prupe.4G124100 Prunus persica HOM05D000246 ORTHO05D009147 6.8e-30 135.2 262 35.1
Duzib213G0662 Durio zibethinus HOM05D000246 ORTHO05D009147 1.5e-29 134.0 246 41.1
Gohir.D08G240200 Gossypium hirsutum HOM05D000246 ORTHO05D009147 5.8e-29 132.1 250 39.2
GSVIVG01036688001 Vitis vinifera HOM05D000246 ORTHO05D009147 9.8e-29 131.3 254 39.8
TAR627G1110 Trochodendron aralioides HOM05D000246 ORTHO05D009147 1.3e-28 131.0 107 66.4
FAN16G3184 Fragaria x ananassa HOM05D000246 ORTHO05D009147 1.7e-28 130.6 268 38.1
Sabra10G0135600 Salix brachista HOM05D000246 ORTHO05D009147 6.4e-28 128.6 294 35.4
Gohir.A08G221640 Gossypium hirsutum HOM05D000246 ORTHO05D009147 8.3e-28 128.3 270 37.4
EL10Ac2g03603 Beta vulgaris HOM05D000246 ORTHO05D009147 1.1e-27 127.9 259 38.2
Hund03211 Selenicereus undatus HOM05D000246 ORTHO05D009147 2.4e-27 126.7 262 40.1
MSTRG.14574 Avicennia marina HOM05D000246 ORTHO05D009147 3.2e-27 126.3 235 38.3
Rhsim04G0003700 Rhododendron simsii HOM05D000146 ORTHO05D000178 5.4e-27 125.6 271 38.4
VMungo1080G0726 Vigna mungo HOM05D000246 ORTHO05D009147 5.4e-27 125.6 280 36.4
AUR62027960 Chenopodium quinoa HOM05D000246 ORTHO05D009147 1.2e-26 124.4 273 36.6
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 1.6e-26 124.0 245 40.0
QL04p096383 Quercus lobata HOM05D000246 ORTHO05D009147 1.6e-26 124.0 298 33.6
Sc23g0006300 Simmondsia chinensis HOM05D000246 ORTHO05D009147 1.6e-26 124.0 276 34.4
FvH4_3g13660 Fragaria vesca HOM05D000246 ORTHO05D009147 3.5e-26 122.9 267 36.7
FAN11G1354 Fragaria x ananassa HOM05D000246 ORTHO05D009147 3.5e-26 122.9 267 36.7
Phvul.005G044100 Phaseolus vulgaris HOM05D000246 ORTHO05D009147 3.5e-26 122.9 283 37.1
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 4.6e-26 122.5 276 36.2
Solyc01g005910.3 Solanum lycopersicum HOM05D000246 ORTHO05D009147 4.6e-26 122.5 235 39.6
Glyma.08G160700 Glycine max HOM05D000246 ORTHO05D009147 6.0e-26 122.1 247 38.1
Medtr2g062820 Medicago truncatula HOM05D000246 ORTHO05D009147 6.0e-26 122.1 272 37.1
AUR62020752 Chenopodium quinoa HOM05D000246 ORTHO05D009147 3.0e-25 119.8 273 36.3
Sopen01g001920 Solanum pennellii HOM05D000246 ORTHO05D009147 3.9e-25 119.4 251 37.5
PGSC0003DMG400032135 Solanum tuberosum HOM05D000246 ORTHO05D009147 5.0e-25 119.0 227 40.1
Oeu029459.1 Olea europaea HOM05D000246 ORTHO05D009147 6.6e-25 118.6 253 37.9
Atru.chr1.7 Acer truncatum HOM05D000246 ORTHO05D009147 8.6e-25 118.2 255 38.0
Lalb_Chr25g0284061 Lupinus albus HOM05D000246 ORTHO05D009147 1.9e-24 117.1 268 35.1
THA.LOC104815716 Tarenaya hassleriana HOM05D000246 ORTHO05D009147 1.9e-24 117.1 274 35.0
PSO675G2776 Papaver somniferum HOM05D000246 ORTHO05D009147 2.5e-24 116.7 267 35.2
DCAR_019903 Daucus carota HOM05D000246 ORTHO05D009147 4.3e-24 115.9 273 35.9
Psat1g130960 Pisum sativum HOM05D000246 ORTHO05D009147 5.6e-24 115.5 280 35.4
ATR0737G104 Amborella trichopoda HOM05D000246 ORTHO05D009147 7.3e-24 115.2 284 35.6
Migut.H01647 Erythranthe guttata HOM05D000246 ORTHO05D009147 4.7e-23 112.5 231 40.3
Lj3g0006435 Lotus japonicus HOM05D000246 ORTHO05D009147 6.2e-23 112.1 263 37.6
Sed0004446 Sechium edule HOM05D000246 ORTHO05D009147 6.2e-23 112.1 258 36.4
Actinidia00851 Actinidia chinensis HOM05D000246 ORTHO05D009147 8.0e-23 111.7 259 37.5
Nitab4.5_0000775g0010 Nicotiana tabacum HOM05D000246 ORTHO05D009147 8.0e-23 111.7 250 36.4
Peaxi162Scf00100g00211 Petunia axillaris HOM05D000246 ORTHO05D009147 8.0e-23 111.7 231 37.7
arahy.Tifrunner.gnm1.ann1.W0YB5X Arachis hypogaea HOM05D000246 ORTHO05D009147 3.1e-22 109.8 283 33.9
Cpa.g.sc118.5 Carica papaya HOM05D000246 ORTHO05D009147 6.8e-22 108.6 246 34.1
arahy.Tifrunner.gnm1.ann1.A1BQQJ Arachis hypogaea HOM05D000246 ORTHO05D009147 1.5e-21 107.5 251 37.1
SGA_v2.0_scaffold239G43996 Striga asiatica HOM05D000246 ORTHO05D009147 2.6e-21 106.7 275 35.6
CANSAT56G0995 Cannabis sativa HOM05D000246 ORTHO05D009147 4.4e-21 105.9 273 34.4
HanXRQChr11g0335881 Helianthus annuus HOM05D000246 ORTHO05D009147 4.4e-21 105.9 284 33.1
Cc00_g09080 Coffea canephora HOM05D000246 ORTHO05D009147 1.3e-20 104.4 257 35.0
TWI59G1123 Tripterygium wilfordii HOM05D000246 ORTHO05D009147 1.3e-20 104.4 236 36.0
CARHR087200 Cardamine hirsuta HOM05D000246 ORTHO05D009147 2.2e-20 103.6 277 32.5
CDE10G0049 Ceratophyllum demersum HOM05D000246 ORTHO05D009147 2.2e-20 103.6 270 33.0
Thhalv10021510m.g Eutrema salsugineum HOM05D000246 ORTHO05D009147 2.9e-20 103.2 236 34.3
RcHm_v2.0_Chr5g0022891 Rosa chinensis HOM05D000246 ORTHO05D009147 3.7e-20 102.8 262 31.3
SalBow1G6486 Salvia bowleyana HOM05D000246 ORTHO05D009147 4.9e-20 102.4 226 37.6
MELO3C019603.2 Cucumis melo HOM05D000246 ORTHO05D009147 1.4e-19 100.9 247 34.8
AL3G24360 Arabidopsis lyrata HOM05D000246 ORTHO05D009147 3.2e-19 99.8 208 36.1
Carub.0003s1204 Capsella rubella HOM05D000246 ORTHO05D009147 3.2e-19 99.8 228 35.5
Nitab4.5_0001059g0130 Nicotiana tabacum HOM05D000246 ORTHO05D009147 3.2e-19 99.8 264 34.1
HPP92_020022 Vanilla planifolia HOM05D000246 ORTHO05D009147 3.2e-19 99.8 280 32.5
CSS0001858 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009147 4.1e-19 99.4 246 37.4
Lsat_1_v5_gn_7_111020 Lactuca sativa HOM05D000246 ORTHO05D009147 4.1e-19 99.4 233 32.6
BcaC09g48255 Brassica carinata HOM05D000246 ORTHO05D009147 7.0e-19 98.6 213 36.2
vmacro09761 Vaccinium macrocarpon HOM05D000246 ORTHO05D009147 9.2e-19 98.2 317 33.8
TPR.G3627 Trifolium pratense HOM05D000246 ORTHO05D009147 1.2e-18 97.8 257 34.6
BcaB04g21046 Brassica carinata HOM05D000146 ORTHO05D009147 1.6e-18 97.4 213 36.2
PGR044G1535 Punica granatum HOM05D000246 ORTHO05D009147 2.1e-18 97.1 260 31.9
Lj5P743T17 Lonicera japonica HOM05D000246 ORTHO05D009147 3.5e-18 96.3 235 34.9
BcaNung07028 Brassica carinata HOM05D000246 ORTHO05D009147 4.6e-18 95.9 210 36.7
C01p52490 Brassica napus HOM05D000246 ORTHO05D009147 4.6e-18 95.9 210 36.7
BolC1t05187H Brassica oleracea HOM05D000246 ORTHO05D009147 4.6e-18 95.9 210 36.7
CsaV3_6G013310 Cucumis sativus L. HOM05D000246 ORTHO05D009147 4.6e-18 95.9 254 33.5
Eucgr.F04484 Eucalyptus grandis HOM05D000246 ORTHO05D009147 6.0e-18 95.5 226 35.8
AT3G12685 Arabidopsis thaliana HOM05D000246 ORTHO05D009147 1.0e-17 94.7 198 36.4
BcaB04g21456 Brassica carinata HOM05D000246 ORTHO05D009147 3.0e-17 93.2 224 34.4
unitig_0.g970 Utricularia gibba HOM05D000246 ORTHO05D009147 3.0e-17 93.2 244 32.4
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 5.1e-17 92.4 218 33.5
Aa31LG7G3500 Aethionema arabicum HOM05D000246 ORTHO05D009147 6.6e-17 92.0 229 32.3
BraA01t04116Z Brassica rapa HOM05D000246 ORTHO05D009147 3.6e-15 86.3 228 32.0
BNapus_Darmor_BZH_scaffold_149p00210 Brassica napus HOM05D000246 ORTHO05D009147 4.7e-15 85.9 234 33.3
Zm00001eb277880 Zea mays HOM05D000246 ORTHO05D009147 4.7e-15 85.9 234 35.5
Sp3g10840 Schrenkiella parvula HOM05D000246 ORTHO05D009147 1.4e-14 84.3 261 29.9
FAN25G2424 Fragaria x ananassa HOM05D000246 ORTHO05D009147 2.0e-13 80.5 169 33.1
Oeu034803.1 Olea europaea HOM05D000246 ORTHO05D009147 4.4e-13 79.3 63 58.7
CDE10G0104 Ceratophyllum demersum HOM05D000246 ORTHO05D009147 1.3e-12 77.8 69 55.1
ClCG02G018880 Citrullus lanatus HOM05D000246 ORTHO05D009147 1.7e-12 77.4 340 26.5
TAR576G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.1e-11 72.8 127 41.7
Sabra01G0090000 Salix brachista HOM05D005208 ORTHO05D009147 3.0e-09 66.6 138 41.3
Hma1.2p1_3527F.1_g336570 Hydrangea macrophylla HOM05D000246 ORTHO05D009147 5.1e-09 65.9 149 41.6
Os06g0530300 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D009147 3.3e-08 63.2 140 37.9
Hma1.2p1_1417F.1_g282150 Hydrangea macrophylla HOM05D000246 ORTHO05D009147 5.6e-08 62.4 50 62.0
Mapoly0003s0007 Marchantia polymorpha HOM05D000246 ORTHO05D009147 5.6e-08 62.4 259 27.8


User provided reference genes

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