Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26670 Nelumbo nucifera HOM05D001085 ORTHO05D000895 4.7e-43 177.6 97 100.0
Nn5g28646 Nelumbo nucifera HOM05D001085 ORTHO05D000895 2.4e-18 95.5 57 93.0
Nn5g29257 Nelumbo nucifera HOM05D001085 ORTHO05D000895 2.0e-17 92.4 77 75.3
Nn6g32266 Nelumbo nucifera HOM05D001085 ORTHO05D000895 2.7e-14 82.0 46 93.5
TAR376G0470 Trochodendron aralioides HOM05D001085 ORTHO05D000895 1.0e-13 80.1 60 76.7
Duzib264G1296 Durio zibethinus HOM05D001085 ORTHO05D000895 2.3e-13 79.0 69 65.2
Atru.chr3.779 Acer truncatum HOM05D001085 ORTHO05D000895 3.0e-13 78.6 58 75.9
Duzib187G1011 Durio zibethinus HOM05D001085 ORTHO05D000895 3.9e-13 78.2 67 68.7
CsaV3_6G046960 Cucumis sativus L. HOM05D001085 ORTHO05D000895 5.1e-13 77.8 65 72.3
ClCG01G020160 Citrullus lanatus HOM05D001085 ORTHO05D000895 8.7e-13 77.0 65 72.3
Gohir.D11G184700 Gossypium hirsutum HOM05D001085 ORTHO05D000895 8.7e-13 77.0 60 71.7
Gohir.A11G176800 Gossypium hirsutum HOM05D001085 ORTHO05D000895 1.1e-12 76.6 63 69.8
Ah.02g124530 Amaranthus hybridus HOM05D001085 ORTHO05D000895 1.5e-12 76.3 73 61.6
Cc07_g10540 Coffea canephora HOM05D001085 ORTHO05D000895 4.3e-12 74.7 68 69.1
Gorai.007G196300 Gossypium raimondii HOM05D001085 ORTHO05D000895 4.3e-12 74.7 60 70.0
Duzib147G0057 Durio zibethinus HOM05D001085 ORTHO05D000895 1.3e-11 73.2 63 68.3
MELO3C007889.2 Cucumis melo HOM05D001085 ORTHO05D000895 1.6e-11 72.8 66 66.7
Thecc.01G021400 Theobroma cacao HOM05D001085 ORTHO05D000895 1.6e-11 72.8 60 71.7
Aqoxy5G01471 Aquilegia oxysepala HOM05D001085 ORTHO05D000895 2.2e-11 72.4 62 67.7
Eucgr.I02364 Eucalyptus grandis HOM05D001085 ORTHO05D000895 2.2e-11 72.4 46 80.4
Cpa.g.sc6.227 Carica papaya HOM05D001085 ORTHO05D000895 3.7e-11 71.6 75 60.0
CANSAT01G1516 Cannabis sativa HOM05D001085 ORTHO05D000895 4.8e-11 71.2 58 69.0
MSTRG.23417 Avicennia marina HOM05D001085 ORTHO05D000895 8.2e-11 70.5 60 66.7
EL10As8g23842 Beta vulgaris HOM05D001085 ORTHO05D000895 8.2e-11 70.5 72 58.3
MBI05_g16281_MAGBIO Magnolia biondii HOM05D001085 ORTHO05D000895 8.2e-11 70.5 62 71.0
MD02G1134400 Malus domestica HOM05D001085 ORTHO05D000895 8.2e-11 70.5 68 63.2
Migut.H01142 Erythranthe guttata HOM05D001085 ORTHO05D000895 1.1e-10 70.1 68 61.8
Lj4A217T63 Lonicera japonica HOM05D001085 ORTHO05D000895 1.1e-10 70.1 63 65.1
Hund16483 Selenicereus undatus HOM05D001085 ORTHO05D000895 1.1e-10 70.1 46 76.1
TWI09G1356 Tripterygium wilfordii HOM05D001085 ORTHO05D000895 1.1e-10 70.1 64 67.2
MD15G1247400 Malus domestica HOM05D001085 ORTHO05D000895 1.4e-10 69.7 46 78.3
Potri.005G116600 Populus trichocarpa HOM05D001085 ORTHO05D000895 2.4e-10 68.9 67 61.2
vmacro18423 Vaccinium macrocarpon HOM05D001085 ORTHO05D000895 2.4e-10 68.9 46 80.4
CiPaw.07G057100 Carya illinoinensis HOM05D001085 ORTHO05D000895 3.1e-10 68.6 70 57.1
PSO541G0098 Papaver somniferum HOM05D001085 ORTHO05D000895 3.1e-10 68.6 65 58.5
SalBow3G0813 Salvia bowleyana HOM05D001085 ORTHO05D000895 3.1e-10 68.6 52 71.2
RcHm_v2.0_Chr2g0099661 Rosa chinensis HOM05D001085 ORTHO05D000895 4.1e-10 68.2 45 75.6
Sed0026662 Sechium edule HOM05D001085 ORTHO05D000895 4.1e-10 68.2 62 66.1
Prupe.7G166400 Prunus persica HOM05D001085 ORTHO05D000895 5.3e-10 67.8 57 64.9
Solyc02g084240.3 Solanum lycopersicum HOM05D001085 ORTHO05D000895 5.3e-10 67.8 63 65.1
Sopen02g028980 Solanum pennellii HOM05D001085 ORTHO05D000895 5.3e-10 67.8 63 65.1
PGSC0003DMG400003632 Solanum tuberosum HOM05D001085 ORTHO05D000895 5.3e-10 67.8 63 65.1
PSO541G1669 Papaver somniferum HOM05D001085 ORTHO05D000895 6.9e-10 67.4 65 56.9
Manes.01G144600 Manihot esculenta HOM05D001085 ORTHO05D000895 9.0e-10 67.0 65 63.1
CSS0032573 Camellia sinensis var. sinensis HOM05D001085 ORTHO05D000895 2.0e-09 65.9 64 62.5
Glyma.11G075500 Glycine max HOM05D001085 ORTHO05D000895 2.0e-09 65.9 67 58.2
Lj2g0027402 Lotus japonicus HOM05D001085 ORTHO05D000895 2.0e-09 65.9 60 68.3
PSO675G3358 Papaver somniferum HOM05D001085 ORTHO05D000895 2.0e-09 65.9 65 56.9
CAN.G2049.5 Capsicum annuum HOM05D001085 ORTHO05D000895 2.6e-09 65.5 63 63.5
Lsat_1_v5_gn_3_73941 Lactuca sativa HOM05D001085 ORTHO05D000895 2.6e-09 65.5 60 61.7
PGR119G1818 Punica granatum HOM05D001085 ORTHO05D000895 2.6e-09 65.5 46 73.9
DCAR_021495 Daucus carota HOM05D001085 ORTHO05D000895 3.4e-09 65.1 62 64.5
HanXRQChr16g0531051 Helianthus annuus HOM05D001085 ORTHO05D000895 3.4e-09 65.1 45 73.3
Sabra05G0095500 Salix brachista HOM05D001085 ORTHO05D000895 3.4e-09 65.1 71 57.7
HPP92_014628 Vanilla planifolia HOM05D001085 ORTHO05D000895 3.4e-09 65.1 57 61.4
VMungo1215G0118 Vigna mungo HOM05D001085 ORTHO05D000895 3.4e-09 65.1 46 71.7
GSVIVG01018807001 Vitis vinifera HOM05D001085 ORTHO05D000895 3.4e-09 65.1 40 85.0
CSS0026336 Camellia sinensis var. sinensis HOM05D001085 ORTHO05D000895 4.5e-09 64.7 60 65.0
PSO675G0557 Papaver somniferum HOM05D001085 ORTHO05D000895 4.5e-09 64.7 64 56.2
Rhsim08G0034600 Rhododendron simsii HOM05D001085 ORTHO05D000895 4.5e-09 64.7 70 62.9
Cfa006955 Carpinus fangiana HOM05D001085 ORTHO05D000895 5.9e-09 64.3 62 66.1
Ca_24907_v3 Cicer arietinum L. HOM05D001085 ORTHO05D000895 5.9e-09 64.3 53 66.0
Hma1.2p1_2281F.1_g318730 Hydrangea macrophylla HOM05D001085 ORTHO05D000895 5.9e-09 64.3 65 60.0
Nitab4.5_0002880g0020 Nicotiana tabacum HOM05D001085 ORTHO05D000895 5.9e-09 64.3 66 57.6
Hma1.2p1_0743F.1_g211540 Hydrangea macrophylla HOM05D001085 ORTHO05D000895 7.6e-09 63.9 46 73.9
Oeu035302.1 Olea europaea HOM05D001085 ORTHO05D000895 7.6e-09 63.9 56 66.1
arahy.Tifrunner.gnm1.ann1.1UPR0X Arachis hypogaea HOM05D001085 ORTHO05D000895 1.0e-08 63.5 45 75.6
PSO675G2548 Papaver somniferum HOM05D001085 ORTHO05D000895 1.0e-08 63.5 58 56.9
PSO541G4883 Papaver somniferum HOM05D001085 ORTHO05D000895 1.3e-08 63.2 61 57.4
Actinidia31007 Actinidia chinensis HOM05D001085 ORTHO05D000895 1.7e-08 62.8 68 58.8
CARHR108540 Cardamine hirsuta HOM05D001085 ORTHO05D000895 1.7e-08 62.8 42 71.4
Haze_03796 Corylus avellana HOM05D001085 ORTHO05D000895 1.7e-08 62.8 58 62.1
PSO675G2076 Papaver somniferum HOM05D001085 ORTHO05D000895 1.7e-08 62.8 61 55.7
Sp3g31490 Schrenkiella parvula HOM05D001085 ORTHO05D000895 2.2e-08 62.4 42 71.4
Potri.007G014200 Populus trichocarpa HOM05D001085 ORTHO05D000895 2.9e-08 62.0 49 69.4
AL3G51200 Arabidopsis lyrata HOM05D001085 ORTHO05D000895 3.8e-08 61.6 44 68.2
Phvul.002G110800 Phaseolus vulgaris HOM05D001085 ORTHO05D000895 3.8e-08 61.6 56 64.3
Nitab4.5_0005721g0020 Nicotiana tabacum HOM05D001085 ORTHO05D000895 5.0e-08 61.2 63 60.3
PSO541G1675 Papaver somniferum HOM05D001085 ORTHO05D000895 5.0e-08 61.2 56 55.4
Sabra07G0011500 Salix brachista HOM05D001085 ORTHO05D000895 5.0e-08 61.2 66 56.1
Peaxi162Scf00083g00822 Petunia axillaris HOM05D001085 ORTHO05D000895 8.5e-08 60.5 61 57.4
QL06p033694 Quercus lobata HOM05D001085 ORTHO05D000895 8.5e-08 60.5 48 66.7
Hund14037 Selenicereus undatus HOM05D001085 ORTHO05D000895 8.5e-08 60.5 71 53.5
Sc03g0003560 Simmondsia chinensis HOM05D001085 ORTHO05D000895 8.5e-08 60.5 68 55.9
arahy.Tifrunner.gnm1.ann1.I41NMG Arachis hypogaea HOM05D001085 ORTHO05D000895 1.1e-07 60.1 70 57.1
FAN28G1748 Fragaria x ananassa HOM05D001085 ORTHO05D000895 1.1e-07 60.1 45 71.1
AT2G18050 Arabidopsis thaliana HOM05D001085 ORTHO05D000895 1.4e-07 59.7 44 65.9
BcaC04g22933 Brassica carinata HOM05D001085 ORTHO05D000895 1.9e-07 59.3 42 69.0
C09p13750 Brassica napus HOM05D001085 ORTHO05D000895 1.9e-07 59.3 42 69.0
BolC9t54264H Brassica oleracea HOM05D001085 ORTHO05D000895 1.9e-07 59.3 42 69.0
BraA09t36814Z Brassica rapa HOM05D001085 ORTHO05D000895 1.9e-07 59.3 42 69.0
FAN26G1623 Fragaria x ananassa HOM05D001085 ORTHO05D000895 3.2e-07 58.5 45 68.9
TPR.G2400 Trifolium pratense HOM05D001085 ORTHO05D000895 3.2e-07 58.5 46 67.4
VMungo0464G1234 Vigna mungo HOM05D001085 ORTHO05D000895 3.2e-07 58.5 67 50.7
Ciclev10026549m.g Citrus clementina HOM05D001085 ORTHO05D000895 4.2e-07 58.2 69 53.6
A09p11690 Brassica napus HOM05D001085 ORTHO05D000895 5.5e-07 57.8 42 69.0
BcaB07g31694 Brassica carinata HOM05D001085 ORTHO05D000895 7.2e-07 57.4 71 49.3
FvH4_1g12030 Fragaria vesca HOM05D001085 ORTHO05D000895 7.2e-07 57.4 52 61.5
Carub.0003s3220 Capsella rubella HOM05D001085 ORTHO05D000895 1.2e-06 56.6 44 65.9
Medtr5g021730 Medicago truncatula HOM05D001085 ORTHO05D000895 1.6e-06 56.2 54 59.3
SEGI_19637 Sequoiadendron giganteum HOM05D001085 ORTHO05D000895 1.6e-06 56.2 47 63.8
ATR0147G002 Amborella trichopoda HOM05D001085 ORTHO05D000895 2.1e-06 55.8 63 55.6
Thhalv10022882m.g Eutrema salsugineum HOM05D001085 ORTHO05D000895 2.1e-06 55.8 69 46.4
QL06p047903 Quercus lobata HOM05D001085 ORTHO05D000895 3.6e-06 55.1 49 63.3
THA.LOC104807487 Tarenaya hassleriana HOM05D001085 ORTHO05D000895 3.6e-06 55.1 55 50.9
THA.LOC104819761 Tarenaya hassleriana HOM05D001085 ORTHO05D000895 7.9e-06 53.9 58 53.4


User provided reference genes

Program Settings