Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 4.9e-75 284.3 133 100.0
Nn3g19974 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.3e-59 233.0 131 84.0
Nn1g00933 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.3e-35 153.3 110 60.9
Nn2g13826 Nelumbo nucifera HOM05D011113 ORTHO05D001339 3.5e-28 128.6 114 51.8
Nn1g06295 Nelumbo nucifera HOM05D011113 ORTHO05D001339 3.0e-24 115.5 100 53.0
Nn2g10617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 8.6e-19 97.4 107 41.1
Nn5g27719 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.7e-14 83.2 63 55.6
Nn3g18240 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.2e-14 82.8 60 58.3
Nn2g11110 Nelumbo nucifera HOM05D011113 ORTHO05D001339 3.7e-14 82.0 64 50.0
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-11 73.2 120 33.3
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 3.3e-10 68.9 134 31.3
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 3.3e-10 68.9 105 32.4
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.3e-10 68.6 120 33.3
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.3e-10 67.8 120 30.8
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-09 65.9 62 45.2
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-09 65.9 87 36.8
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 2.8e-09 65.9 101 33.7
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-09 65.5 98 34.7
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-09 65.5 90 36.7
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-09 65.5 90 36.7
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 3.6e-09 65.5 72 34.7
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-09 65.1 62 45.2
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-09 64.7 62 45.2
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-09 64.7 62 45.2
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 6.1e-09 64.7 62 45.2
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 63.9 90 36.7
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 63.9 62 45.2
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 63.9 90 36.7
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.0e-08 63.9 101 35.6
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-08 63.5 62 45.2
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 1.8e-08 63.2 117 29.9
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-08 62.4 62 40.3
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-08 62.4 62 40.3
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 3.1e-08 62.4 60 43.3
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-08 62.4 62 40.3
MBI02_g35767_MAGBIO Magnolia biondii HOM05D000084 ORTHO05D002966 3.1e-08 62.4 84 35.7
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 3.1e-08 62.4 85 35.3
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-08 62.0 64 45.3
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-08 61.6 64 43.8
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-08 61.6 64 43.8
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.8e-08 61.2 115 32.2
TAR633G1545 Trochodendron aralioides HOM05D011113 ORTHO05D001339 6.8e-08 61.2 73 39.7
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 8.9e-08 60.8 87 36.8
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-07 60.5 72 37.5
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.5e-07 60.1 95 31.6
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-07 60.1 62 43.5
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-07 60.1 62 43.5
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-07 60.1 62 43.5
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-07 60.1 64 42.2
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-07 59.7 62 43.5
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-07 59.7 92 32.6
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 2.0e-07 59.7 84 38.1
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.0e-07 59.7 84 38.1
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.0e-07 59.7 84 38.1
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.0e-07 59.7 84 38.1
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-07 59.3 78 32.1
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 3.4e-07 58.9 93 32.3
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-07 58.9 72 37.5
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-07 58.9 64 42.2
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-07 58.9 60 46.7
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-07 58.9 72 37.5
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 3.4e-07 58.9 85 34.1
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.4e-07 58.5 89 32.6
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-07 58.5 60 46.7
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-07 58.5 81 30.9
MBI08_g05234_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.4e-07 58.5 83 34.9
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 4.4e-07 58.5 62 38.7
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 4.4e-07 58.5 84 29.8
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 5.8e-07 58.2 65 40.0
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.8e-07 58.2 89 32.6
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-07 58.2 72 37.5
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-07 58.2 88 29.5
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-07 58.2 64 45.3
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 7.5e-07 57.8 92 32.6
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 7.5e-07 57.8 62 46.8
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 7.5e-07 57.8 102 31.4
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 9.8e-07 57.4 65 38.5
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.8e-07 57.4 79 31.6
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 9.8e-07 57.4 87 32.2
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 9.8e-07 57.4 92 28.3
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.8e-07 57.4 95 32.6
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-06 57.0 89 32.6
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-06 57.0 60 46.7
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-06 57.0 60 46.7
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-06 57.0 62 41.9
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-06 57.0 49 42.9
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-06 56.6 60 41.7
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-06 56.6 81 29.6
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-06 56.6 81 29.6
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-06 56.6 78 30.8
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.2e-06 56.2 79 31.6
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-06 56.2 58 37.9
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-06 56.2 60 45.0
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-06 56.2 88 28.4
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.9e-06 55.8 66 36.4
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.9e-06 55.8 65 36.9
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-06 55.8 57 38.6
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 3.7e-06 55.5 80 33.8
Lj2C953T7 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 55.5 62 37.1
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 55.5 67 37.3
Lju583C3G3 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 55.5 81 33.3
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 4.9e-06 55.1 85 30.6
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.9e-06 55.1 85 29.4
Lj6A103G46 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-06 55.1 59 39.0
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 6.4e-06 54.7 108 26.9
Lj2A804T55 Lonicera japonica HOM05D002180 ORTHO05D001339 6.4e-06 54.7 60 40.0
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 8.3e-06 54.3 64 35.9
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 8.3e-06 54.3 56 41.1
MBI07_g11400_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 8.3e-06 54.3 89 33.7


User provided reference genes

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