Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 6.1e-76 287.3 140 100.0
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.5e-50 203.0 139 71.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 7.6e-50 200.7 129 75.2
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 9.9e-50 200.3 137 70.1
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.9e-49 198.7 129 76.7
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.9e-48 196.1 140 70.7
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 4.1e-48 194.9 127 73.2
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 7.1e-48 194.1 129 72.9
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 7.1e-48 194.1 129 73.6
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.7e-47 192.2 133 68.4
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 3.5e-47 191.8 127 73.2
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 7.8e-47 190.7 133 71.4
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.0e-46 190.3 129 69.8
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.3e-46 189.9 128 71.9
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.7e-46 189.5 135 69.6
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 2.3e-46 189.1 129 71.3
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 5.1e-46 188.0 129 71.3
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 6.6e-46 187.6 131 70.2
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 8.6e-46 187.2 129 69.0
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.3e-45 185.3 135 66.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 3.3e-45 185.3 120 77.5
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.3e-45 184.9 129 69.0
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 5.6e-45 184.5 135 68.9
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 9.6e-45 183.7 133 71.4
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 9.6e-45 183.7 120 72.5
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.2e-44 183.3 120 75.0
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 1.6e-44 183.0 141 65.2
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.6e-44 181.8 120 74.2
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 6.2e-44 181.0 120 73.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 6.2e-44 181.0 127 69.3
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 8.1e-44 180.6 129 68.2
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 8.1e-44 180.6 130 66.9
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 8.1e-44 180.6 141 65.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.4e-43 179.9 120 73.3
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.4e-43 179.9 130 69.2
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.8e-43 179.5 129 67.4
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.8e-43 179.5 129 67.4
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 3.1e-43 178.7 145 64.1
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 4.0e-43 178.3 120 72.5
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 4.0e-43 178.3 142 62.0
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 5.2e-43 177.9 131 68.7
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 5.2e-43 177.9 133 65.4
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 5.2e-43 177.9 129 68.2
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 6.9e-43 177.6 122 70.5
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 8.9e-43 177.2 143 64.3
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.2e-42 176.8 163 59.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.5e-42 176.4 129 69.0
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.4e-42 175.3 129 68.2
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.4e-42 174.9 129 68.2
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.3e-41 173.3 129 68.2
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.7e-41 172.9 129 67.4
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.2e-41 172.6 118 69.5
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 3.8e-41 171.8 120 70.8
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.4e-41 171.0 118 71.2
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.9e-40 169.5 130 62.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 3.2e-40 168.7 128 66.4
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 4.2e-40 168.3 118 67.8
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 5.4e-40 167.9 120 68.3
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.4e-40 167.9 120 70.8
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 5.4e-40 167.9 121 71.1
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 7.1e-40 167.5 136 58.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 9.3e-40 167.2 130 62.3
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.2e-39 166.8 137 62.0
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.2e-39 166.8 130 60.8
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 1.2e-39 166.8 120 69.2
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-39 166.4 134 62.7
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.6e-39 166.4 139 63.3
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.1e-39 166.0 130 63.8
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.1e-39 166.0 126 67.5
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 6.0e-39 164.5 130 62.3
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 6.0e-39 164.5 136 65.4
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 7.8e-39 164.1 120 66.7
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.8e-39 164.1 120 69.2
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.0e-38 163.7 129 64.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.3e-38 163.3 133 61.7
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.7e-38 162.9 120 65.0
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.3e-38 162.5 129 65.1
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 5.1e-38 161.4 130 59.2
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 6.6e-38 161.0 129 61.2
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-37 160.2 120 65.8
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 2.5e-37 159.1 128 61.7
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.3e-37 158.3 119 65.5
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.3e-36 156.8 120 63.3
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.6e-36 156.4 130 65.4
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.6e-36 155.2 126 66.7
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 6.2e-36 154.5 130 64.6
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.6e-34 149.1 121 64.5
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 3.4e-34 148.7 121 63.6
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 2.9e-33 145.6 121 65.3
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 8.4e-33 144.1 121 62.8
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 8.4e-33 144.1 121 61.2
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 8.4e-33 144.1 121 62.8
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 8.4e-33 144.1 121 62.8
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.4e-32 143.3 121 60.3
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.9e-32 142.9 148 49.3
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 2.4e-32 142.5 121 61.2
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 2.4e-32 142.5 121 63.6
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 5.4e-32 141.4 121 63.6
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.6e-31 139.8 135 54.8
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.7e-31 139.0 121 62.0
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 3.5e-31 138.7 121 59.5
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 4.8e-28 128.3 120 58.3
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 6.9e-27 124.4 121 54.5
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.5e-26 123.2 135 51.1
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 2.0e-26 122.9 139 50.4
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 7.6e-26 120.9 138 48.6
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.7e-25 119.8 87 65.5
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.8e-22 109.8 71 71.8
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.4e-19 99.4 150 36.0
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.4e-19 99.4 87 59.8
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 5.8e-18 94.7 80 61.2
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.2e-17 92.8 57 70.2
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 4.3e-13 78.6 117 41.9
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 6.3e-12 74.7 50 64.0
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.1e-11 73.9 109 37.6


User provided reference genes

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