Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 1.0e-67 260.0 136 100.0
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 6.7e-35 151.0 101 71.3
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 2.4e-32 142.5 99 71.7
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 3.1e-32 142.1 123 62.6
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 1.2e-31 140.2 99 70.7
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.2e-31 140.2 133 57.1
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.2e-31 140.2 133 57.1
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 1.5e-31 139.8 139 55.4
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 4.5e-31 138.3 97 70.1
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.8e-31 137.9 139 53.2
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 5.8e-31 137.9 156 52.6
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 7.6e-31 137.5 153 52.3
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.7e-30 136.3 130 60.8
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 2.2e-30 136.0 147 55.8
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 2.9e-30 135.6 143 51.0
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 8.4e-30 134.0 133 57.1
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.4e-29 133.3 122 59.8
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.4e-29 133.3 123 56.9
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 1.4e-29 133.3 161 48.4
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.2e-29 131.7 117 60.7
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.6e-28 129.8 122 55.7
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 1.6e-28 129.8 154 49.4
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 2.1e-28 129.4 156 51.3
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 2.7e-28 129.0 149 49.0
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 2.7e-28 129.0 119 57.1
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 3.5e-28 128.6 139 50.4
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.5e-28 128.6 116 61.2
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 3.5e-28 128.6 131 53.4
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 3.5e-28 128.6 131 53.4
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 4.6e-28 128.3 121 57.0
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 6.0e-28 127.9 155 49.7
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 6.0e-28 127.9 155 49.7
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 6.0e-28 127.9 145 51.0
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 6.0e-28 127.9 145 51.0
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 7.9e-28 127.5 135 51.1
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.3e-27 126.7 120 58.3
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 1.8e-27 126.3 119 56.3
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.8e-27 126.3 116 56.0
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.8e-27 126.3 116 56.0
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.8e-27 126.3 137 51.1
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 1.8e-27 126.3 128 53.9
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 2.3e-27 125.9 147 48.3
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.3e-27 125.9 129 52.7
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 3.0e-27 125.6 122 56.6
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 3.9e-27 125.2 119 55.5
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 6.7e-27 124.4 116 56.0
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 8.7e-27 124.0 139 50.4
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.1e-26 123.6 119 52.9
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 1.5e-26 123.2 123 52.8
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 1.5e-26 123.2 121 54.5
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.5e-26 123.2 147 47.6
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.9e-26 122.9 126 53.2
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.9e-26 122.9 126 53.2
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.9e-26 122.9 130 50.8
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 2.5e-26 122.5 113 57.5
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 3.3e-26 122.1 121 54.5
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 4.3e-26 121.7 126 52.4
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 4.3e-26 121.7 125 52.8
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 4.3e-26 121.7 131 49.6
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 4.3e-26 121.7 183 42.6
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 7.4e-26 120.9 113 56.6
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 7.4e-26 120.9 121 53.7
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 7.4e-26 120.9 115 55.7
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 9.7e-26 120.6 116 54.3
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 2.2e-25 119.4 140 50.0
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 2.2e-25 119.4 143 46.9
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.2e-25 119.4 123 52.0
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.2e-25 119.4 123 52.0
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 2.2e-25 119.4 123 52.0
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 2.8e-25 119.0 125 52.0
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 2.8e-25 119.0 121 54.5
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 6.3e-25 117.9 130 50.0
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 8.2e-25 117.5 139 49.6
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 8.2e-25 117.5 118 56.8
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 1.1e-24 117.1 140 46.4
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.1e-24 117.1 124 51.6
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 1.1e-24 117.1 121 54.5
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.4e-24 116.7 117 51.3
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 1.4e-24 116.7 121 52.9
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.8e-24 116.3 132 49.2
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.4e-24 115.9 180 43.3
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 3.1e-24 115.5 114 53.5
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 4.1e-24 115.2 149 45.6
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 5.3e-24 114.8 72 79.2
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 6.9e-24 114.4 118 53.4
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 9.0e-24 114.0 121 54.5
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 9.0e-24 114.0 119 49.6
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.5e-23 113.2 136 46.3
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 2.0e-23 112.8 97 61.9
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 7.6e-23 110.9 123 48.0
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 1.0e-22 110.5 119 46.2
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 3.8e-22 108.6 120 49.2
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 5.5e-21 104.8 65 80.0
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 7.9e-20 100.9 132 38.6
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 7.9e-20 100.9 122 46.7
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 3.0e-19 99.0 70 67.1
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.0e-19 99.0 93 54.8
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.1e-18 97.1 73 65.8
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.1e-18 97.1 95 54.7
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.7e-17 93.2 68 70.6
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 2.2e-17 92.8 127 43.3
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 2.4e-16 89.4 117 37.6
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 3.1e-16 89.0 112 44.6
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 5.3e-16 88.2 102 50.0
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.0e-15 86.3 49 85.7
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 5.9e-15 84.7 88 51.1
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.3e-14 83.6 137 41.6
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 1.6e-12 76.6 89 52.8
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 4.1e-08 62.0 76 47.4
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 6.5e-06 54.7 73 42.5


User provided reference genes

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