Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.5e-65 252.7 122 100.0
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.1e-60 236.5 118 95.8
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.0e-51 205.7 119 73.9
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.0e-51 205.7 119 73.9
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.0e-50 203.4 119 81.5
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.1e-49 199.9 119 76.5
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 1.5e-49 199.5 119 79.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.9e-49 199.1 119 81.5
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 5.6e-49 197.6 119 79.8
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 9.5e-49 196.8 119 78.2
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 9.5e-49 196.8 119 77.3
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.2e-48 196.4 119 79.0
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.1e-48 195.7 119 79.0
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 1.8e-47 192.6 119 75.6
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 4.0e-47 191.4 119 73.9
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.0e-47 191.4 119 73.9
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 4.0e-47 191.4 119 73.1
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 4.0e-47 191.4 119 73.1
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 5.2e-47 191.0 119 76.5
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 5.2e-47 191.0 115 77.4
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 8.9e-47 190.3 119 72.3
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 3.4e-46 188.3 119 78.2
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 3.4e-46 188.3 119 72.3
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 7.5e-46 187.2 119 74.8
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 7.5e-46 187.2 119 70.6
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.3e-45 186.4 119 73.1
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.7e-45 186.0 119 72.3
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 2.2e-45 185.7 119 74.8
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 2.2e-45 185.7 119 69.7
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 4.9e-45 184.5 119 71.4
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 4.1e-44 181.4 119 76.5
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 4.1e-44 181.4 119 73.9
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 7.1e-44 180.6 119 66.4
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 9.2e-44 180.3 119 75.6
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.2e-43 179.9 119 74.8
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.2e-43 179.9 119 74.8
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.2e-43 179.9 119 74.8
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 1.2e-43 179.9 119 73.9
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 2.1e-43 179.1 119 66.4
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.7e-43 178.7 119 71.4
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 7.8e-43 177.2 117 64.1
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.3e-42 176.4 123 66.7
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.9e-42 174.9 119 69.7
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 5.1e-42 174.5 117 75.2
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 6.6e-42 174.1 119 66.4
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 8.6e-42 173.7 119 68.1
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.9e-41 172.6 119 71.4
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.5e-41 172.2 117 65.0
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 3.3e-41 171.8 119 72.3
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 7.3e-41 170.6 117 65.8
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 7.3e-41 170.6 119 74.8
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 2.1e-40 169.1 119 70.6
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.1e-40 169.1 119 68.1
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 2.8e-40 168.7 119 69.7
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 6.2e-40 167.5 119 71.4
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.1e-39 166.8 119 66.4
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.1e-39 166.8 119 70.6
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.4e-39 166.4 119 65.5
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 3.1e-39 165.2 119 63.9
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 3.1e-39 165.2 119 69.7
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 4.0e-39 164.9 119 64.7
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 4.0e-39 164.9 119 68.9
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 6.8e-39 164.1 119 68.1
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.2e-38 163.3 119 64.7
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 2.0e-38 162.5 119 67.2
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 2.6e-38 162.2 119 69.7
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 2.6e-38 162.2 119 63.9
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 3.4e-38 161.8 119 71.4
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 4.4e-38 161.4 119 68.9
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 4.4e-38 161.4 119 63.9
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 5.8e-38 161.0 119 68.1
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 7.6e-38 160.6 119 58.0
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 9.9e-38 160.2 119 63.9
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 1.7e-37 159.5 119 65.5
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.7e-37 159.5 119 68.9
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 2.2e-37 159.1 119 65.5
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 2.2e-37 159.1 119 63.9
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.7e-37 158.3 118 65.3
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.7e-37 158.3 118 65.3
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 4.9e-37 157.9 119 64.7
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 4.9e-37 157.9 119 64.7
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 4.9e-37 157.9 119 64.7
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 4.9e-37 157.9 119 64.7
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 8.3e-37 157.1 119 63.9
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 1.1e-36 156.8 119 65.5
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 4.1e-36 154.8 119 63.0
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.1e-36 154.8 166 53.6
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 9.2e-36 153.7 117 66.7
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 4.6e-35 151.4 106 67.0
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 1.0e-34 150.2 119 64.7
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.3e-34 149.8 106 66.0
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 7.3e-33 144.1 117 62.4
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 2.1e-32 142.5 116 54.3
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 6.2e-32 141.0 119 56.3
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 9.3e-28 127.1 80 77.5
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.1e-25 120.2 67 76.1
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.9e-25 119.4 119 55.5
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.2e-21 105.9 67 71.6
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 3.5e-19 98.6 81 58.0
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 1.1e-17 93.6 60 73.3
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.7e-13 79.7 61 65.6
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 1.4e-12 76.6 127 31.5
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 5.4e-12 74.7 118 32.2
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 1.2e-11 73.6 119 28.6
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 5.6e-09 64.7 127 31.5
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 5.3e-07 58.2 33 69.7
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.2e-06 57.0 128 28.1


User provided reference genes

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