Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 1.4e-54 216.5 148 100.0
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 2.5e-19 99.4 143 49.7
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 4.6e-13 78.6 126 50.8
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 7.8e-13 77.8 143 41.3
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 7.8e-13 77.8 144 38.2
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 1.0e-12 77.4 152 38.2
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 1.1e-11 73.9 141 39.7
Aqoxy7G00619 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 3.3e-11 72.4 153 41.2
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 7.3e-11 71.2 139 34.5
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 3.6e-10 68.9 139 47.5
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 6.2e-10 68.2 144 48.6
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 8.1e-10 67.8 135 46.7
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 1.8e-09 66.6 145 35.2
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 3.1e-09 65.9 161 30.4
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 4.0e-09 65.5 143 41.3
Aqoxy7G00620 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 2.0e-08 63.2 145 37.2
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.0e-08 63.2 137 36.5
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 4.4e-08 62.0 143 42.0
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 9.9e-08 60.8 143 48.3
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 6.4e-07 58.2 136 44.1
Nitab4.5_0002786g0070 Nicotiana tabacum HOM05D012743 ORTHO05D010153 8.4e-07 57.8 149 32.9
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 1.1e-06 57.4 143 48.3
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.1e-06 57.4 140 31.4
Oeu022504.1 Olea europaea HOM05D008269 ORTHO05D010153 1.1e-06 57.4 137 33.6
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 1.4e-06 57.0 139 34.5
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 1.4e-06 57.0 134 29.9
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 3.2e-06 55.8 137 44.5
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 3.2e-06 55.8 140 42.9
DCAR_018124 Daucus carota HOM05D008269 ORTHO05D010153 3.2e-06 55.8 139 34.5
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 3.2e-06 55.8 169 31.4
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 4.2e-06 55.5 158 33.5
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 5.4e-06 55.1 139 41.0
Oeu021725.1 Olea europaea HOM05D012743 ORTHO05D010153 7.1e-06 54.7 154 39.0
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 7.1e-06 54.7 167 31.7


User provided reference genes

Program Settings