Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 4.2e-240 834.3 441 100.0
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.6e-167 593.2 420 71.9
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.4e-166 590.1 403 74.2
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 3.7e-159 565.5 393 69.7
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 1.4e-158 563.5 383 71.8
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 6.9e-158 561.2 413 68.8
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 7.7e-157 557.8 382 71.2
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 6.5e-156 554.7 395 68.6
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 9.4e-155 550.8 423 68.3
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 2.7e-154 549.3 397 68.8
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 7.9e-154 547.7 396 68.2
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 7.9e-154 547.7 439 65.6
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 3.9e-153 545.4 384 69.3
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 1.1e-152 543.9 395 67.6
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 2.6e-152 542.7 395 67.8
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 1.3e-151 540.4 411 65.9
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 2.2e-151 539.7 397 67.8
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 6.3e-151 538.1 397 67.5
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 8.2e-151 537.7 415 64.8
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 1.1e-150 537.3 397 67.0
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 1.4e-150 537.0 396 66.9
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 5.3e-150 535.0 393 66.9
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 9.1e-150 534.3 395 66.1
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 3.5e-149 532.3 394 65.0
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 3.5e-149 532.3 393 66.7
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 7.7e-149 531.2 396 66.2
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 1.7e-148 530.0 394 66.0
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 3.8e-148 528.9 394 65.7
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 5.0e-148 528.5 392 65.1
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 6.5e-148 528.1 420 61.0
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 2.5e-147 526.2 423 63.1
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 4.2e-147 525.4 395 64.8
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 4.2e-147 525.4 422 63.3
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.2e-146 523.9 394 65.5
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 3.6e-146 522.3 379 66.5
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 6.1e-146 521.5 449 60.6
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 8.0e-146 521.2 384 65.9
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.8e-145 520.0 394 65.0
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.0e-145 519.2 422 63.5
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 1.5e-144 516.9 397 65.2
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 5.7e-144 515.0 396 65.4
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 2.8e-143 512.7 358 67.3
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 3.7e-143 512.3 424 61.8
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.7e-143 512.3 359 67.4
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 4.8e-143 511.9 379 67.0
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 1.1e-142 510.8 397 64.7
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.1e-142 510.8 396 64.4
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 2.4e-142 509.6 395 64.6
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 3.1e-142 509.2 386 65.0
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 5.3e-142 508.4 390 64.6
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 7.0e-142 508.1 387 65.1
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 1.6e-141 506.9 430 60.2
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 1.6e-141 506.9 387 65.1
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 3.5e-141 505.8 394 64.5
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 5.9e-141 505.0 417 61.2
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 1.3e-140 503.8 387 66.4
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 2.9e-140 502.7 341 70.4
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 3.8e-140 502.3 396 62.6
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 5.0e-140 501.9 396 62.1
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 2.5e-139 499.6 339 69.9
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 7.2e-139 498.0 425 60.2
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 2.7e-138 496.1 394 63.5
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 3.6e-138 495.7 359 65.7
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 4.7e-138 495.4 395 63.0
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 4.7e-138 495.4 417 60.2
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 6.1e-138 495.0 421 60.3
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 1.0e-137 494.2 415 59.3
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.8e-137 493.4 322 74.8
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 6.8e-137 491.5 341 68.9
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 1.5e-136 490.3 395 62.3
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 2.0e-136 490.0 394 62.9
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 5.7e-136 488.4 424 58.7
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 3.7e-135 485.7 413 59.6
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 2.4e-134 483.0 340 67.9
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 4.1e-134 482.3 401 60.3
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 4.1e-134 482.3 360 65.3
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 7.0e-134 481.5 420 58.8
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.2e-133 480.7 365 63.8
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 2.0e-133 479.9 381 63.8
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 4.5e-133 478.8 398 60.6
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 5.9e-133 478.4 355 64.8
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.0e-132 477.6 422 59.2
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.3e-132 477.2 382 63.6
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 2.9e-132 476.1 393 60.8
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 2.9e-132 476.1 362 65.5
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 1.1e-131 474.2 453 55.8
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.1e-130 469.9 448 56.9
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.1e-130 469.9 448 56.9
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 4.7e-130 468.8 415 58.8
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 1.1e-126 457.6 384 58.6
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 5.4e-126 455.3 383 59.0
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 1.6e-125 453.8 384 58.1
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 2.0e-125 453.4 426 57.5
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 2.7e-125 453.0 411 56.7
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 5.9e-125 451.8 384 58.3
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.0e-124 451.1 396 60.6
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 1.0e-124 451.1 386 59.1
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 5.0e-124 448.7 379 58.8
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 1.1e-123 447.6 396 58.1
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 1.5e-123 447.2 398 59.5
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.5e-123 445.3 396 57.8
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 7.2e-123 444.9 394 58.6
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 1.2e-122 444.1 362 61.6
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 2.1e-122 443.4 394 58.1
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 4.7e-122 442.2 363 59.2
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 6.1e-122 441.8 394 57.9
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 8.0e-122 441.4 404 55.7
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.4e-121 440.7 385 57.1
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 5.2e-121 438.7 411 54.7
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 5.2e-121 438.7 380 57.4
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.2e-120 437.6 426 52.6
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 1.2e-120 437.6 363 60.6
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 3.4e-120 436.0 379 57.3
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 4.4e-120 435.6 369 59.1
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 7.5e-120 434.9 379 57.3
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 7.5e-120 434.9 321 67.3
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 1.7e-119 433.7 379 57.0
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 3.2e-118 429.5 379 56.5
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 2.3e-116 423.3 290 69.7
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.6e-114 417.2 453 51.4
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.6e-112 409.8 430 51.4
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 8.0e-106 388.3 321 57.6
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 2.2e-103 380.2 292 62.7
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 8.6e-100 368.2 287 63.1
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 1.9e-99 367.1 291 60.1
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 2.1e-98 363.6 297 59.9
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 6.6e-92 342.0 296 57.8
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.1e-91 341.3 361 48.5
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 6.2e-90 335.5 411 46.5
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 4.9e-87 325.9 375 45.1
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.6e-85 319.3 300 53.7
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.9e-84 316.2 420 46.0
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 6.9e-81 305.4 384 43.8
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 2.8e-74 283.5 344 48.0
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 5.8e-72 275.8 198 67.2
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.4e-62 244.6 321 44.5
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.3e-59 233.4 227 54.2
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 6.2e-58 229.2 301 42.2
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 1.0e-55 221.9 361 38.0
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 1.0e-55 221.9 361 38.0
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.1e-52 209.5 232 48.3
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.6e-50 204.5 186 60.2
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 4.5e-48 196.4 363 36.1
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 5.0e-47 193.0 132 66.7
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 5.9e-40 169.5 372 32.3
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.1e-33 147.1 293 35.5
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 4.8e-26 123.2 105 57.1
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 1.1e-25 122.1 380 25.3
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 4.1e-25 120.2 372 26.6
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 3.0e-20 104.0 125 49.6
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 4.0e-20 103.6 100 57.0
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 2.0e-19 101.3 251 28.7
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.9e-14 84.7 53 69.8
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 4.2e-14 83.6 86 51.2
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 4.2e-14 83.6 86 51.2
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 3.1e-09 67.4 76 52.6
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 1.2e-08 65.5 41 70.7


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