Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.5e-102 376.3 208 100.0
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.0e-46 189.9 208 54.8
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 3.5e-43 179.1 200 53.5
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 3.0e-42 176.0 211 51.2
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.9e-41 173.3 204 50.5
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 1.9e-41 173.3 204 50.5
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.1e-40 169.9 103 79.6
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 3.6e-40 169.1 103 79.6
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 3.6e-40 169.1 103 79.6
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 4.7e-40 168.7 204 49.0
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 8.1e-40 167.9 206 55.3
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.1e-39 167.5 195 51.3
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 3.1e-39 166.0 139 61.2
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 3.1e-39 166.0 103 79.6
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 3.1e-39 166.0 184 54.3
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 4.0e-39 165.6 199 50.3
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 5.2e-39 165.2 204 50.0
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 6.8e-39 164.9 156 59.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 4.4e-38 162.2 202 51.0
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 7.5e-38 161.4 185 57.8
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 1.3e-37 160.6 202 48.0
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.7e-37 160.2 136 60.3
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.2e-37 159.8 104 74.0
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.2e-37 159.8 101 75.2
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 2.2e-37 159.8 187 52.4
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 6.4e-37 158.3 200 49.5
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 6.4e-37 158.3 97 78.4
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 8.3e-37 157.9 201 47.3
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.1e-36 157.5 204 49.0
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.4e-36 157.1 99 79.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.4e-36 157.1 203 47.8
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 2.4e-36 156.4 200 47.0
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.2e-36 156.0 199 47.7
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.2e-36 156.0 153 56.2
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 4.1e-36 155.6 203 50.7
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 5.4e-36 155.2 172 51.2
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 1.2e-35 154.1 200 51.5
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-35 154.1 172 49.4
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-35 154.1 172 49.4
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 1.2e-35 154.1 103 72.8
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.6e-35 153.7 164 59.1
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.1e-35 153.3 172 50.6
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-35 152.9 178 49.4
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 3.5e-35 152.5 97 75.3
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 4.6e-35 152.1 160 60.6
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.6e-35 152.1 168 51.2
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 7.8e-35 151.4 163 52.1
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.3e-34 150.6 102 70.6
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.7e-34 150.2 178 48.3
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.7e-34 150.2 103 70.9
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 1.7e-34 150.2 200 47.5
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 2.3e-34 149.8 201 44.3
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 2.3e-34 149.8 201 44.3
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 2.3e-34 149.8 201 44.3
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.3e-34 149.8 202 46.5
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 2.3e-34 149.8 191 49.2
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 3.9e-34 149.1 200 43.5
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 6.6e-34 148.3 206 47.6
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 8.6e-34 147.9 182 46.2
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-33 147.5 178 48.9
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.1e-33 147.5 186 45.2
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.1e-33 147.5 135 58.5
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.1e-33 147.5 140 59.3
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.5e-33 147.1 102 68.6
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.9e-33 146.7 171 52.0
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 2.5e-33 146.4 164 50.6
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 2.5e-33 146.4 103 68.9
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 3.3e-33 146.0 97 69.1
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 3.3e-33 146.0 122 66.4
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 7.3e-33 144.8 192 46.4
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.2e-32 144.1 176 47.2
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.6e-32 143.7 201 45.8
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.6e-32 143.7 148 55.4
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 3.6e-32 142.5 100 66.0
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 6.2e-32 141.7 101 66.3
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.1e-31 141.0 140 52.9
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.4e-31 139.8 199 45.7
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 3.1e-31 139.4 202 43.6
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 8.9e-31 137.9 107 62.6
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.5e-30 137.1 100 67.0
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 2.0e-30 136.7 102 66.7
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 4.4e-30 135.6 138 55.1
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 4.4e-30 135.6 107 60.7
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 4.4e-30 135.6 168 52.4
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 4.4e-30 135.6 104 63.5
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.9e-28 130.2 84 72.6
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 1.7e-26 123.6 167 53.3
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.7e-26 123.6 118 53.4
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 3.9e-26 122.5 156 46.2
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 5.3e-23 112.1 170 40.6
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 6.9e-23 111.7 66 81.8
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 2.9e-21 106.3 103 55.3
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 2.4e-20 103.2 204 35.8
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.7e-18 97.1 99 50.5
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 9.6e-17 91.3 94 52.1
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.6e-16 89.4 44 88.6
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.5e-14 84.0 81 49.4
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 3.4e-14 82.8 154 39.6
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 3.4e-14 82.8 154 39.6
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 4.5e-14 82.4 49 73.5
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 2.4e-12 76.6 207 35.3
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 2.4e-12 76.6 157 38.9
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 4.2e-12 75.9 147 36.7
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.4e-12 75.5 126 39.7
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 2.7e-11 73.2 120 38.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.8e-10 70.5 163 43.6
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.5e-09 67.4 160 43.8
Ah.07g208070 Amaranthus hybridus HOM05D000130 ORTHO05D009058 9.9e-06 54.7 161 37.9


User provided reference genes

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