Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 3.2e-68 261.5 126 100.0
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 3.2e-68 261.5 126 100.0
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 1.6e-62 242.7 124 88.7
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 2.7e-62 241.9 124 89.5
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 2.7e-62 241.9 124 89.5
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 5.9e-62 240.7 124 90.3
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 1.3e-61 239.6 124 89.5
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.3e-61 238.8 124 86.3
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.3e-61 238.8 124 86.3
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 2.9e-61 238.4 124 87.1
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 3.8e-61 238.0 124 87.9
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 5.0e-61 237.7 124 89.5
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 6.6e-61 237.3 123 87.0
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 6.6e-61 237.3 124 87.1
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 1.1e-60 236.5 125 84.8
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 1.1e-60 236.5 124 87.1
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 1.1e-60 236.5 124 88.7
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 1.9e-60 235.7 124 85.5
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 1.9e-60 235.7 124 84.7
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 1.9e-60 235.7 124 86.3
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 2.5e-60 235.3 123 87.0
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 2.5e-60 235.3 124 87.1
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 4.2e-60 234.6 123 85.4
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 4.2e-60 234.6 124 86.3
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 5.6e-60 234.2 124 86.3
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 5.6e-60 234.2 123 85.4
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 5.6e-60 234.2 124 87.1
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 7.2e-60 233.8 123 87.0
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 9.5e-60 233.4 126 84.9
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 9.5e-60 233.4 124 85.5
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 1.6e-59 232.6 124 83.9
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 1.6e-59 232.6 124 84.7
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 1.6e-59 232.6 124 86.3
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 2.1e-59 232.3 126 84.1
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 2.1e-59 232.3 124 83.9
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 2.1e-59 232.3 124 85.5
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 3.6e-59 231.5 126 84.1
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 3.6e-59 231.5 124 84.7
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 4.7e-59 231.1 124 83.1
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 4.7e-59 231.1 123 84.6
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 4.7e-59 231.1 124 83.9
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 6.1e-59 230.7 125 82.4
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 6.1e-59 230.7 124 83.1
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 6.1e-59 230.7 124 83.9
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 8.0e-59 230.3 124 84.7
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 8.0e-59 230.3 124 83.1
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 8.0e-59 230.3 124 84.7
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 8.0e-59 230.3 124 85.5
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 8.0e-59 230.3 123 85.4
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 1.8e-58 229.2 124 83.1
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 1.8e-58 229.2 124 83.1
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 1.8e-58 229.2 124 83.1
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 2.3e-58 228.8 124 86.3
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 2.3e-58 228.8 124 83.1
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 2.3e-58 228.8 124 81.5
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 2.3e-58 228.8 126 81.0
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 3.0e-58 228.4 124 82.3
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 4.0e-58 228.0 126 81.7
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 5.2e-58 227.6 125 82.4
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 5.2e-58 227.6 124 82.3
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 6.8e-58 227.3 124 80.6
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 6.8e-58 227.3 124 84.7
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 8.9e-58 226.9 124 82.3
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 1.2e-57 226.5 126 78.6
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 1.5e-57 226.1 124 84.7
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 2.6e-57 225.3 123 81.3
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 2.6e-57 225.3 124 82.3
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 3.4e-57 224.9 124 79.8
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 4.4e-57 224.6 123 81.3
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 4.4e-57 224.6 124 83.1
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 4.4e-57 224.6 124 83.1
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 5.7e-57 224.2 123 81.3
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 5.7e-57 224.2 126 77.8
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 5.7e-57 224.2 126 78.6
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 1.3e-56 223.0 123 80.5
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 1.3e-56 223.0 123 80.5
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 1.3e-56 223.0 123 80.5
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 1.3e-56 223.0 123 80.5
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 1.3e-56 223.0 123 80.5
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 1.3e-56 223.0 125 78.4
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 1.7e-56 222.6 123 79.7
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 8.3e-56 220.3 122 77.9
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 1.8e-55 219.2 164 65.9
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 1.8e-55 219.2 123 78.9
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 2.4e-55 218.8 124 77.4
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 4.1e-55 218.0 123 78.9
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 9.2e-55 216.9 126 75.4
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 9.2e-55 216.9 126 75.4
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 3.3e-52 208.4 124 73.4
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 1.6e-51 206.1 126 69.8
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 3.0e-45 185.3 92 89.1
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 5.0e-45 184.5 92 89.1
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 1.1e-44 183.3 122 64.8
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 1.6e-43 179.5 92 84.8
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 8.1e-43 177.2 88 88.6
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 8.1e-43 177.2 88 88.6
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 1.1e-42 176.8 122 60.7
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 2.0e-41 172.6 122 59.0
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 7.5e-41 170.6 105 73.3
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 1.6e-38 162.9 127 59.1
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 5.1e-37 157.9 87 74.7
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 5.1e-37 157.9 87 74.7
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 7.6e-33 144.1 74 86.5
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 7.6e-33 144.1 81 80.2
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 6.4e-32 141.0 79 82.3
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 3.2e-31 138.7 81 80.2
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 1.9e-23 112.8 66 72.7
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 1.2e-22 110.2 63 73.0
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 1.6e-19 99.8 87 56.3
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 6.9e-18 94.4 45 88.9
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 1.5e-17 93.2 64 67.2
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 1.3e-16 90.1 45 86.7
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 2.2e-16 89.4 44 86.4
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 3.8e-16 88.6 48 81.2
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 5.4e-15 84.7 84 51.2
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 7.9e-14 80.9 119 31.9
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 1.3e-13 80.1 60 63.3
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 1.3e-13 80.1 47 78.7
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 2.6e-09 65.9 58 60.3
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 7.1e-07 57.8 27 88.9
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 6.0e-06 54.7 27 85.2


User provided reference genes

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