Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 5.9e-161 570.9 295 100.0
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.3e-141 505.8 304 88.5
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 8.8e-133 477.2 296 82.8
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 8.5e-128 460.7 296 79.7
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 5.5e-127 458.0 296 80.1
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 5.5e-127 458.0 295 80.7
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 1.0e-125 453.8 296 78.4
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 2.3e-125 452.6 296 77.4
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 5.2e-125 451.4 296 79.7
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 9.8e-124 447.2 297 78.1
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 5.4e-122 441.4 295 77.3
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 1.2e-121 440.3 298 78.5
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 1.6e-121 439.9 296 76.7
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 3.5e-121 438.7 298 76.5
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 3.5e-121 438.7 296 77.0
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 4.5e-121 438.3 297 76.1
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 4.5e-121 438.3 296 76.4
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 1.0e-120 437.2 297 77.8
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 1.3e-120 436.8 297 77.1
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 1.3e-120 436.8 296 76.4
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.7e-120 436.4 296 75.3
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 2.3e-120 436.0 298 76.2
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 2.3e-120 436.0 296 75.3
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 2.9e-120 435.6 296 76.0
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 3.8e-120 435.3 300 76.7
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.6e-120 434.1 298 77.5
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.5e-119 433.3 297 77.4
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 1.9e-119 433.0 296 76.7
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.3e-119 432.2 298 77.5
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 3.3e-119 432.2 301 75.7
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 3.3e-119 432.2 297 77.8
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 4.2e-119 431.8 295 77.3
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.5e-119 431.4 298 77.5
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 5.5e-119 431.4 296 75.3
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 5.5e-119 431.4 296 75.3
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.2e-118 430.3 298 77.5
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 1.2e-118 430.3 298 76.2
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 1.2e-118 430.3 295 74.9
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 2.1e-118 429.5 298 76.8
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 2.8e-118 429.1 296 76.0
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 2.8e-118 429.1 296 74.3
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 3.6e-118 428.7 298 75.8
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 4.7e-118 428.3 297 73.7
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 4.7e-118 428.3 295 75.9
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.1e-118 427.9 298 76.5
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 1.0e-117 427.2 303 76.9
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.0e-117 427.2 295 76.3
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.4e-117 426.8 304 77.0
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.4e-117 426.8 298 76.5
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 2.3e-117 426.0 293 76.1
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 3.0e-117 425.6 298 74.8
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 3.0e-117 425.6 295 73.9
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 4.0e-117 425.2 298 76.2
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 5.2e-117 424.9 295 75.3
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 8.9e-117 424.1 302 74.5
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.2e-116 423.7 296 74.0
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.5e-116 423.3 297 75.8
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 2.0e-116 422.9 299 74.6
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 2.0e-116 422.9 297 73.1
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.4e-116 421.8 298 75.5
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 5.7e-116 421.4 297 75.8
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 7.5e-116 421.0 295 73.9
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 1.7e-115 419.9 295 75.3
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 3.7e-115 418.7 299 73.9
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 1.1e-114 417.2 300 74.3
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.8e-114 416.4 299 73.2
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 5.4e-114 414.8 295 74.6
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.6e-113 413.3 300 74.0
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 1.6e-113 413.3 297 72.7
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 1.6e-113 413.3 297 72.7
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 2.7e-113 412.5 312 70.2
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 5.9e-113 411.4 293 73.0
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 1.0e-112 410.6 295 73.9
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.0e-112 410.6 299 74.2
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 1.7e-112 409.8 298 72.5
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 8.6e-112 407.5 300 73.0
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.5e-111 406.8 302 72.8
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 4.3e-111 405.2 300 73.0
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 9.5e-111 404.1 226 89.4
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.8e-109 397.9 297 71.4
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 6.8e-109 397.9 295 72.2
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 2.6e-108 396.0 300 71.7
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 3.4e-108 395.6 300 71.3
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 2.2e-107 392.9 296 71.6
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 4.9e-107 391.7 302 69.9
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 1.9e-106 389.8 299 70.9
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 1.9e-106 389.8 299 70.9
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 3.2e-106 389.0 299 70.9
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 3.2e-106 389.0 299 70.9
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 3.2e-106 389.0 299 70.9
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 1.2e-105 387.1 383 58.7
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 1.6e-105 386.7 295 70.5
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 4.6e-105 385.2 299 69.2
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 1.3e-104 383.6 296 69.9
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.7e-104 383.3 235 82.6
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 2.3e-104 382.9 236 82.2
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 3.9e-104 382.1 301 68.1
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 6.6e-104 381.3 298 70.5
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 1.9e-103 379.8 302 68.2
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 4.3e-103 378.6 301 68.4
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 9.5e-103 377.5 257 73.9
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 4.0e-101 372.1 300 68.7
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 1.2e-100 370.5 264 75.0
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 3.5e-97 359.0 234 77.8
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.7e-94 348.6 252 71.4
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 4.7e-94 348.6 285 67.0
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 4.0e-93 345.5 229 75.5
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.2e-92 344.0 230 76.1
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 9.2e-90 334.3 205 81.5
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 1.9e-87 326.6 227 72.2
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 5.6e-87 325.1 221 73.3
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 1.3e-83 313.9 235 69.4
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 4.7e-78 295.4 203 71.4
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 5.4e-74 282.0 213 69.5
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 4.6e-73 278.9 249 58.2
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.1e-61 239.6 137 84.7
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 6.9e-61 238.4 144 78.5
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 5.8e-52 208.8 203 50.2
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 4.2e-50 202.6 211 51.2
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 1.7e-38 164.1 218 40.4
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 2.4e-37 160.2 86 90.7
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 3.8e-35 152.9 89 86.5
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 2.5e-34 150.2 83 89.2
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 4.2e-26 122.9 64 87.5
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 7.5e-07 58.9 86 46.5


User provided reference genes

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