Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 1.1e-40 169.5 83 100.0
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 1.6e-23 112.5 85 65.9
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 4.7e-23 110.9 73 75.3
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 4.7e-23 110.9 73 75.3
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 8.0e-23 110.2 72 76.4
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 1.4e-22 109.4 73 74.0
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 1.4e-22 109.4 73 74.0
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 1.8e-22 109.0 73 72.6
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 3.0e-22 108.2 71 71.8
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 5.2e-22 107.5 84 70.2
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 6.7e-22 107.1 58 84.5
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 6.7e-22 107.1 82 67.1
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 6.7e-22 107.1 78 69.2
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.1e-21 106.3 68 73.5
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 1.5e-21 105.9 73 69.9
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 1.5e-21 105.9 63 82.5
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 2.0e-21 105.5 83 67.5
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 4.4e-21 104.4 60 80.0
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 5.7e-21 104.0 74 71.6
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 5.7e-21 104.0 74 71.6
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 7.5e-21 103.6 78 67.9
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 1.3e-20 102.8 82 69.5
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 1.7e-20 102.4 74 71.6
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 1.7e-20 102.4 80 65.0
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 1.7e-20 102.4 77 70.1
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 1.7e-20 102.4 66 74.2
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 2.2e-20 102.1 66 71.2
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 2.2e-20 102.1 76 68.4
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 2.8e-20 101.7 60 78.3
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 4.8e-20 100.9 64 75.0
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 6.3e-20 100.5 66 72.7
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 8.2e-20 100.1 65 73.8
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 8.2e-20 100.1 67 68.7
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 1.4e-19 99.4 57 77.2
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 1.4e-19 99.4 81 67.9
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 1.8e-19 99.0 59 76.3
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 2.4e-19 98.6 80 63.8
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 2.4e-19 98.6 66 71.2
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 3.1e-19 98.2 60 73.3
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 7.0e-19 97.1 69 66.7
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 9.1e-19 96.7 60 78.3
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 9.1e-19 96.7 69 68.1
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 1.2e-18 96.3 57 75.4
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 1.2e-18 96.3 56 76.8
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 1.6e-18 95.9 66 66.7
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 1.6e-18 95.9 67 68.7
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 2.0e-18 95.5 75 65.3
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 2.7e-18 95.1 60 71.7
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 3.5e-18 94.7 77 59.7
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 7.7e-18 93.6 64 70.3
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 7.7e-18 93.6 81 59.3
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 7.7e-18 93.6 75 64.0
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 1.0e-17 93.2 83 57.8
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 1.0e-17 93.2 70 67.1
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 1.0e-17 93.2 59 71.2
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 1.3e-17 92.8 83 56.6
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 2.2e-17 92.0 87 62.1
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 3.8e-17 91.3 82 53.7
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 3.8e-17 91.3 57 68.4
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 5.0e-17 90.9 64 67.2
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 5.0e-17 90.9 59 67.8
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 2.5e-16 88.6 63 66.7
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 5.5e-16 87.4 67 65.7
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 7.2e-16 87.0 47 85.1
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 7.2e-16 87.0 47 85.1
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 7.2e-16 87.0 47 85.1
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 9.4e-16 86.7 82 56.1
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 9.4e-16 86.7 82 56.1
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 1.2e-15 86.3 77 59.7
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 1.6e-15 85.9 59 64.4
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 1.6e-15 85.9 68 64.7
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.6e-15 85.9 70 55.7
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 2.1e-15 85.5 64 68.8
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 4.7e-15 84.3 47 76.6
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 4.7e-15 84.3 76 57.9
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 4.7e-15 84.3 57 59.6
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 8.0e-15 83.6 69 58.0
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 1.4e-14 82.8 76 53.9
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 1.4e-14 82.8 60 66.7
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 1.4e-14 82.8 68 55.9
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 4.0e-14 81.3 51 72.5
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 1.5e-13 79.3 52 73.1
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 2.0e-13 79.0 56 67.9
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 3.4e-13 78.2 56 67.9
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 3.4e-13 78.2 61 60.7
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.2e-12 75.5 44 72.7
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.8e-11 72.4 82 52.4
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 9.1e-11 70.1 72 50.0
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 4.5e-10 67.8 37 75.7
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 5.9e-10 67.4 52 51.9
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 1.0e-09 66.6 75 49.3
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 2.2e-09 65.5 49 63.3
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 1.5e-08 62.8 39 71.8
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 1.9e-08 62.4 56 51.8
Hund24561 Selenicereus undatus HOM05D007586 ORTHO05D009554 2.5e-08 62.0 35 80.0
AUR62030290 Chenopodium quinoa HOM05D004624 ORTHO05D005357 6.1e-07 57.4 43 65.1
Rhsim02G0016900 Rhododendron simsii HOM05D007586 ORTHO05D009554 8.0e-07 57.0 54 57.4


User provided reference genes

Program Settings