Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 0.0e+00 1208.7 755 100.0
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 4.6e-234 815.1 756 73.1
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 8.0e-154 548.5 756 50.8
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 1.2e-69 268.9 713 34.1
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 9.7e-67 259.2 718 31.6
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 2.2e-66 258.1 691 31.3
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 6.1e-61 240.0 718 31.1
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 7.9e-61 239.6 722 30.7
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 2.3e-60 238.0 756 30.2
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 1.1e-59 235.7 769 28.6
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.7e-55 221.9 756 27.2
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 3.8e-55 220.7 723 28.2
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 6.3e-50 203.4 577 30.2
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 9.4e-46 189.5 756 25.0
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 2.8e-42 177.9 757 31.4
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 1.1e-41 176.0 723 25.7
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 1.4e-41 175.6 722 31.3
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 3.8e-39 167.5 894 24.8
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 2.5e-38 164.9 759 26.0
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 7.2e-38 163.3 762 26.4
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 9.4e-38 162.9 722 27.8
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 4.7e-37 160.6 260 38.1
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 1.0e-36 159.5 698 23.6
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 6.7e-36 156.8 757 31.8
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 8.8e-36 156.4 577 31.7
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 3.3e-35 154.5 611 27.5
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 5.7e-35 153.7 756 27.1
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 1.7e-34 152.1 760 25.3
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.2e-34 151.8 645 28.5
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 3.7e-34 151.0 756 27.4
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 9.1e-33 146.4 565 27.3
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 1.6e-32 145.6 761 24.3
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 1.6e-32 145.6 756 25.3
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 5.0e-31 140.6 441 32.4
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 1.9e-30 138.7 756 23.8
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 1.6e-29 135.6 757 22.7
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 8.0e-29 133.3 726 24.1
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.2e-27 129.4 756 25.5
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 4.4e-27 127.5 757 24.8
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 9.8e-27 126.3 606 28.5
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 8.3e-26 123.2 530 24.3
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 2.4e-25 121.7 760 26.3
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 3.1e-25 121.3 550 27.3
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.6e-24 119.0 634 27.3
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 2.0e-24 118.6 531 25.0
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 7.7e-24 116.7 604 29.1
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 1.0e-23 116.3 314 30.6
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 1.3e-23 115.9 555 26.7
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 1.7e-23 115.5 759 23.1
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.3e-23 115.2 669 25.0
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 3.8e-23 114.4 669 25.0
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 6.6e-23 113.6 272 29.8
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 6.6e-23 113.6 272 29.8
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 8.6e-23 113.2 557 24.4
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.5e-22 112.5 230 33.5
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 7.2e-22 110.2 714 23.5
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 9.5e-22 109.8 718 24.8
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 1.2e-21 109.4 465 26.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.2e-21 109.4 581 24.8
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.8e-21 108.2 760 29.7
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 3.6e-21 107.8 329 34.3
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 1.0e-20 106.3 755 28.6
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 3.0e-20 104.8 497 28.6
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 4.0e-20 104.4 190 35.3
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.2e-19 102.8 718 24.1
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.2e-19 102.8 724 25.3
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 1.5e-19 102.4 232 31.9
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 4.4e-19 100.9 715 23.8
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 7.5e-19 100.1 353 32.3
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 9.8e-19 99.8 774 25.3
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 2.2e-18 98.6 766 22.2
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 2.8e-18 98.2 716 23.3
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 4.9e-18 97.4 249 28.9
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 6.3e-18 97.1 715 24.8
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 8.3e-18 96.7 253 28.5
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 2.4e-17 95.1 715 23.1
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 2.4e-17 95.1 762 24.8
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 4.1e-17 94.4 365 24.4
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 9.2e-17 93.2 762 25.7
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.6e-16 92.4 771 23.5
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.6e-16 92.4 510 29.6
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 2.7e-16 91.7 767 24.8
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 5.9e-16 90.5 510 29.4
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 1.3e-15 89.4 721 25.9
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 2.9e-15 88.2 211 29.4
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 2.9e-15 88.2 440 26.1
CDE02G2189 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.5e-14 85.9 753 27.0
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 1.9e-14 85.5 757 20.9
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 1.9e-14 85.5 757 20.9
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 2.5e-14 85.1 510 28.4
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 3.3e-14 84.7 506 22.7
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 1.6e-13 82.4 231 29.0
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 2.1e-13 82.0 264 25.0
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 2.8e-13 81.6 722 27.0
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.7e-13 80.9 563 25.4
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 3.1e-12 78.2 761 22.6
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 3.1e-12 78.2 759 24.1
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 4.0e-12 77.8 619 25.5
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 6.8e-12 77.0 267 27.3
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 8.9e-12 76.6 177 35.0
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 1.5e-11 75.9 717 23.3
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 2.6e-11 75.1 180 31.1
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 2.6e-11 75.1 759 23.8
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 1.3e-10 72.8 142 31.0
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.7e-10 72.4 639 26.3
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 2.2e-10 72.0 449 27.2
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 3.7e-10 71.2 725 25.5
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.7e-10 71.2 717 22.3
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 6.4e-10 70.5 158 32.3
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 1.9e-09 68.9 779 25.0
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 3.2e-09 68.2 715 24.2
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.6e-08 65.9 715 20.4
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 1.6e-08 65.9 171 29.8
Ah.04g159890 Amaranthus hybridus HOM05D004923 ORTHO05D005940 7.8e-08 63.5 99 42.4
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 7.8e-08 63.5 248 29.4
AL3G15330 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 5.0e-07 60.8 315 23.2
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 8.6e-07 60.1 280 29.6
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 1.1e-06 59.7 548 23.0
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 1.9e-06 58.9 380 24.7
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 5.6e-06 57.4 268 26.5
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 9.5e-06 56.6 778 21.6
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 9.5e-06 56.6 718 22.8
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 9.5e-06 56.6 240 23.8


User provided reference genes

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