Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 9.0e-108 393.7 208 100.0
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 1.2e-46 190.7 216 56.9
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.7e-35 152.9 214 46.3
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 3.3e-33 146.0 219 42.9
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 1.7e-29 133.7 216 41.7
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 4.9e-29 132.1 132 61.4
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 8.4e-29 131.3 215 40.5
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 4.2e-28 129.0 203 46.3
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 2.1e-27 126.7 209 42.1
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 4.6e-27 125.6 193 44.0
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 1.9e-25 120.2 217 38.7
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 3.3e-25 119.4 219 41.1
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 3.3e-25 119.4 218 36.7
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 1.6e-24 117.1 219 36.5
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 1.1e-23 114.4 203 41.4
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 1.4e-23 114.0 150 49.3
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 2.4e-23 113.2 159 44.7
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 4.0e-23 112.5 222 34.7
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 1.2e-22 110.9 221 38.0
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 1.5e-22 110.5 209 40.2
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 3.4e-22 109.4 213 34.7
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 5.8e-22 108.6 184 39.7
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 7.6e-22 108.2 206 37.9
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.7e-21 107.1 190 38.9
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 2.9e-21 106.3 213 37.6
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 1.4e-20 104.0 189 39.7
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 1.9e-20 103.6 149 40.3
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 9.3e-20 101.3 200 37.5
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 1.2e-19 100.9 186 41.4
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 1.6e-19 100.5 161 42.2
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 2.1e-19 100.1 162 40.7
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 6.0e-19 98.6 206 34.0
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 1.0e-18 97.8 191 41.4
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 3.0e-18 96.3 152 44.1
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 1.5e-17 94.0 196 37.2
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 2.5e-17 93.2 169 37.3
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 3.3e-17 92.8 195 34.9
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 2.1e-16 90.1 203 35.0
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 1.8e-15 87.0 176 37.5
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 9.0e-15 84.7 199 35.7
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 7.6e-14 81.6 183 33.9
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 2.7e-11 73.2 162 33.3
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 1.3e-10 70.9 142 33.1
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 1.5e-09 67.4 97 42.3
Dinv21746 Davidia involucrata HOM05D008610 ORTHO05D010832 1.6e-08 63.9 67 53.7
Phvul.003G048100 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 4.8e-08 62.4 138 28.3
unitig_0.g90 Utricularia gibba HOM05D003014 ORTHO05D003233 4.8e-08 62.4 141 29.8
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 1.1e-07 61.2 165 30.3
QL02p004396 Quercus lobata HOM05D003014 ORTHO05D003233 1.4e-07 60.8 139 27.3
VMungo0251G1556 Vigna mungo HOM05D003014 ORTHO05D003233 5.3e-07 58.9 156 26.3
VMungo0251G3056 Vigna mungo HOM05D003014 ORTHO05D003233 1.2e-06 57.8 146 28.1
SEGI_29446 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 1.5e-06 57.4 131 29.8
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 7.6e-06 55.1 148 26.4
Zm00001eb074320 Zea mays HOM05D001604 ORTHO05D001432 7.6e-06 55.1 157 25.5


User provided reference genes

Program Settings