Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 0.0e+00 1307.7 695 100.0
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 1.4e-96 358.2 664 39.8
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 1.5e-90 338.2 692 41.3
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 9.8e-90 335.5 665 37.3
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.3e-70 271.9 676 34.6
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 1.9e-69 268.1 664 34.6
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 3.3e-69 267.3 658 33.1
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 9.5e-69 265.8 692 35.3
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 1.2e-68 265.4 656 34.5
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 6.2e-68 263.1 662 34.0
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 1.8e-67 261.5 706 34.0
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 6.8e-67 259.6 709 32.4
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.5e-66 258.5 715 33.3
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 2.0e-66 258.1 656 32.9
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 1.3e-65 255.4 656 32.6
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 1.7e-65 255.0 666 35.0
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 8.3e-65 252.7 637 34.2
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 2.4e-64 251.1 732 30.7
TAR633G2120 Trochodendron aralioides HOM05D007342 ORTHO05D009252 9.2e-64 249.2 280 54.3
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 1.3e-62 245.4 644 33.4
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 1.3e-62 245.4 736 30.6
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 6.6e-62 243.0 657 33.8
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 6.6e-62 243.0 657 34.4
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 8.6e-62 242.7 704 31.1
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 1.1e-61 242.3 658 34.5
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 1.1e-61 242.3 722 32.4
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 1.5e-61 241.9 650 33.2
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 3.6e-60 237.3 657 33.3
CiPaw.01G148300 Carya illinoinensis HOM05D007342 ORTHO05D009252 8.1e-60 236.1 432 38.9
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 1.4e-59 235.3 665 33.1
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 1.8e-59 235.0 655 33.3
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 2.3e-59 234.6 701 33.0
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 6.8e-59 233.0 655 31.9
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 4.4e-58 230.3 673 32.5
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 1.3e-57 228.8 654 31.7
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 4.1e-56 223.8 695 30.6
PSO832G2203 Papaver somniferum HOM05D007342 ORTHO05D009252 9.2e-56 222.6 539 35.8
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 7.8e-55 219.5 677 32.1
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 2.3e-54 218.0 691 31.5
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 2.3e-54 218.0 691 31.5
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 3.0e-54 217.6 658 33.7
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 3.9e-54 217.2 692 31.6
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 5.1e-54 216.9 666 33.8
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 2.5e-53 214.5 695 32.8
Phvul.003G105800 Phaseolus vulgaris HOM05D007342 ORTHO05D009252 4.3e-53 213.8 698 31.1
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 8.9e-51 206.1 645 32.2
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 2.0e-50 204.9 652 30.2
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 4.4e-50 203.8 661 30.4
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 7.6e-50 203.0 683 30.0
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 1.3e-49 202.2 659 28.2
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 6.4e-49 199.9 649 31.6
MBI18_g13693_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 1.9e-48 198.4 540 32.2
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 1.2e-47 195.7 671 30.6
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 1.2e-47 195.7 678 31.6
arahy.Tifrunner.gnm1.ann1.4CZB08 Arachis hypogaea HOM05D007342 ORTHO05D009252 1.6e-44 185.3 668 30.4
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 2.1e-44 184.9 621 32.0
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 1.1e-43 182.6 680 29.3
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 1.4e-43 182.2 696 29.0
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 5.2e-43 180.3 665 29.3
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 7.6e-42 176.4 667 27.9
Lalb_Chr12g0196601 Lupinus albus HOM05D007342 ORTHO05D009252 7.6e-42 176.4 659 31.0
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 1.7e-41 175.3 687 30.6
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 2.2e-41 174.9 767 29.1
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 2.4e-40 171.4 654 30.4
Sp7g14200 Schrenkiella parvula HOM05D007342 ORTHO05D009252 9.3e-40 169.5 652 30.1
arahy.Tifrunner.gnm1.ann1.0PW7WM Arachis hypogaea HOM05D007342 ORTHO05D009252 1.2e-39 169.1 674 30.0
Lsat_1_v5_gn_5_56841 Lactuca sativa HOM05D007342 ORTHO05D009252 1.6e-39 168.7 656 27.3
MBI18_g13694_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 6.0e-39 166.8 757 28.3
CARHR290340 Cardamine hirsuta HOM05D007342 ORTHO05D009252 1.3e-38 165.6 554 31.0
Carub.0007s2583 Capsella rubella HOM05D007342 ORTHO05D009252 3.9e-38 164.1 692 26.7
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 2.5e-37 161.4 653 27.0
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 9.6e-37 159.5 637 28.7
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 1.6e-36 158.7 695 29.8
TAR633G1503 Trochodendron aralioides HOM05D007342 ORTHO05D009252 2.1e-36 158.3 214 51.4
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 2.8e-36 157.9 638 27.0
CDE02G3410 Ceratophyllum demersum HOM05D007342 ORTHO05D009252 6.9e-35 153.3 464 31.0
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 7.6e-34 149.8 655 28.7
Psat4g027440 Pisum sativum HOM05D007342 ORTHO05D009252 9.9e-34 149.4 745 27.2
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 3.8e-33 147.5 607 30.1
Thhalv10025032m.g Eutrema salsugineum HOM05D007342 ORTHO05D009252 8.4e-33 146.4 652 27.6
DCAR_023285 Daucus carota HOM05D007342 ORTHO05D009252 1.1e-32 146.0 560 28.6
Aa31LG10G6280 Aethionema arabicum HOM05D007342 ORTHO05D009252 5.4e-32 143.7 683 25.6
Oeu045723.1 Olea europaea HOM05D007342 ORTHO05D009252 5.4e-32 143.7 257 36.6
BcaC06g33445 Brassica carinata HOM05D007342 ORTHO05D009252 3.5e-31 141.0 673 27.0
C07p47420 Brassica napus HOM05D007342 ORTHO05D009252 3.5e-31 141.0 673 27.0
BolC7t45269H Brassica oleracea HOM05D007342 ORTHO05D009252 3.5e-31 141.0 673 27.0
AT4G15820 Arabidopsis thaliana HOM05D007342 ORTHO05D009252 1.3e-30 139.0 574 27.5
BraA03t14036Z Brassica rapa HOM05D007342 ORTHO05D009252 1.1e-29 136.0 675 26.4
vmacro15234 Vaccinium macrocarpon HOM05D007342 ORTHO05D009252 8.1e-28 129.8 665 28.7
A03p49350 Brassica napus HOM05D007342 ORTHO05D009252 2.4e-27 128.3 673 25.4
BcaC06g32967 Brassica carinata HOM05D007342 ORTHO05D009252 4.5e-26 124.0 187 40.6
THA.LOC104820268 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 2.9e-25 121.3 124 51.6
Lalb_Chr07g0177731 Lupinus albus HOM05D007342 ORTHO05D009252 1.1e-24 119.4 131 49.6
unitig_37.g12398 Utricularia gibba HOM05D007342 ORTHO05D009252 4.2e-24 117.5 655 27.9
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.6e-23 115.5 153 44.4
Lj3P820T26 Lonicera japonica HOM05D007342 ORTHO05D009252 3.5e-23 114.4 491 26.7
CsaV3_6G022280 Cucumis sativus L. HOM05D007342 ORTHO05D009252 1.0e-22 112.8 371 30.2
HPP92_016942 Vanilla planifolia HOM05D007342 ORTHO05D009252 2.8e-20 104.8 240 35.4
Sed0007886 Sechium edule HOM05D007342 ORTHO05D009252 3.1e-19 101.3 406 29.1
DCAR_023500 Daucus carota HOM05D007342 ORTHO05D009252 5.3e-19 100.5 219 32.9
THA.LOC104810667 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 9.0e-19 99.8 103 51.5
THA.LOC104820435 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 2.6e-18 98.2 103 50.5
Lj3P817T41 Lonicera japonica HOM05D007342 ORTHO05D009252 4.6e-15 87.4 355 29.0
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 1.0e-14 86.3 122 41.0
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 2.3e-14 85.1 122 38.5
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-14 85.1 122 38.5
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-14 85.1 122 38.5
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.0e-14 84.7 122 38.5
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 3.0e-14 84.7 122 38.5
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.9e-14 84.3 122 38.5
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 5.1e-14 84.0 122 37.7
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 1.1e-13 82.8 122 37.7
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.9e-13 82.0 144 34.7
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 3.3e-13 81.3 122 38.5
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 5.7e-13 80.5 183 31.7
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 9.7e-13 79.7 122 36.9
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 1.3e-12 79.3 122 36.9
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 1.3e-12 79.3 122 35.2
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.3e-12 79.3 122 36.9
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 1.6e-12 79.0 122 37.7
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 2.1e-12 78.6 122 36.9
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 2.1e-12 78.6 122 37.7
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 2.1e-12 78.6 122 37.7
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 2.1e-12 78.6 122 36.9
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 2.8e-12 78.2 116 37.1
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 2.8e-12 78.2 122 36.1
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 2.8e-12 78.2 122 36.9
EL10Ac2g03667 Beta vulgaris HOM05D007342 ORTHO05D009252 4.8e-12 77.4 449 25.4
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 4.8e-12 77.4 122 36.9
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 6.3e-12 77.0 122 34.4
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 6.3e-12 77.0 112 35.7
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 6.3e-12 77.0 122 36.1
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 6.3e-12 77.0 122 36.1
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 8.2e-12 76.6 122 36.9
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 8.2e-12 76.6 122 36.9
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 8.2e-12 76.6 123 37.4
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 8.2e-12 76.6 116 36.2
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 1.1e-11 76.3 124 37.9
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 1.1e-11 76.3 122 36.1
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 1.1e-11 76.3 122 36.1
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 1.1e-11 76.3 122 36.9
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 1.1e-11 76.3 122 36.1
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 1.1e-11 76.3 116 37.1
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 1.4e-11 75.9 122 36.1
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 1.4e-11 75.9 118 33.9
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 1.4e-11 75.9 122 35.2
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.4e-11 75.9 122 36.1
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 1.8e-11 75.5 122 35.2
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 1.8e-11 75.5 122 36.9
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 1.8e-11 75.5 122 36.1
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.8e-11 75.5 122 36.9
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 2.4e-11 75.1 122 33.6
Eucgr.L03117 Eucalyptus grandis HOM05D007342 ORTHO05D009252 2.4e-11 75.1 431 26.9
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 2.4e-11 75.1 157 34.4
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 3.1e-11 74.7 122 36.1
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 3.1e-11 74.7 122 33.6
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 4.1e-11 74.3 116 34.5
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 4.1e-11 74.3 116 33.6
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 4.1e-11 74.3 116 35.3
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 4.1e-11 74.3 122 34.4
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 4.1e-11 74.3 125 35.2
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 4.1e-11 74.3 116 35.3
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 5.3e-11 73.9 122 34.4
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 6.9e-11 73.6 122 36.1
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 6.9e-11 73.6 250 29.2
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 6.9e-11 73.6 123 36.6
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 1.2e-10 72.8 122 35.2
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 2.0e-10 72.0 123 35.0
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 2.0e-10 72.0 122 35.2
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 5.9e-10 70.5 116 31.9
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 5.9e-10 70.5 106 38.7
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 7.6e-10 70.1 116 34.5
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 6.5e-09 67.0 122 32.8
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 2.5e-08 65.1 122 34.4
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 3.2e-08 64.7 243 24.7
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 9.3e-08 63.2 147 29.3
CBR_g23443 Chara braunii HOM05D005676 ORTHO05D007375 1.0e-06 59.7 114 32.5
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 8.7e-06 56.6 329 21.9


User provided reference genes

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