Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 4.9e-171 604.4 302 100.0
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.6e-142 509.6 304 84.5
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 79.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 4.3e-135 485.0 304 79.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.4e-133 479.9 304 78.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.8e-133 479.6 304 79.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.9e-133 477.6 304 78.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.9e-133 477.6 298 79.9
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-132 476.9 302 78.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 2.6e-132 475.7 303 78.9
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 4.5e-132 474.9 298 79.5
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.2e-131 472.6 304 76.3
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 78.3
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 5.0e-131 471.5 304 76.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 6.5e-131 471.1 304 76.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.4e-130 469.9 299 77.6
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.9e-130 469.5 304 76.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.5e-130 469.2 304 76.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 3.2e-130 468.8 304 77.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 9.3e-130 467.2 304 75.0
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 9.3e-130 467.2 298 78.2
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.2e-129 466.8 304 76.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 2.1e-129 466.1 304 76.6
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 6.1e-129 464.5 298 75.8
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.1e-129 464.5 304 75.7
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.3e-128 463.4 301 75.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.3e-128 463.4 304 75.7
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.3e-128 462.6 304 73.7
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.3e-128 462.6 304 75.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.3e-128 462.6 297 76.8
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.9e-128 461.8 302 75.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 6.7e-128 461.1 304 75.0
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 8.7e-128 460.7 304 75.3
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 8.7e-128 460.7 304 75.3
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.1e-127 460.3 298 77.5
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.5e-127 459.9 304 73.7
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.5e-127 459.1 304 74.0
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.5e-127 459.1 304 74.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.5e-127 459.1 304 74.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.3e-127 458.4 304 74.7
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 7.4e-127 457.6 298 76.8
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 9.7e-127 457.2 304 73.7
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 2.2e-126 456.1 304 75.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.8e-126 454.9 304 74.7
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 73.0
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 73.0
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.4e-125 453.4 304 75.3
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.4e-125 453.4 292 76.4
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-125 453.4 304 74.3
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.4e-125 452.6 304 73.0
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 4.1e-125 451.8 304 73.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 5.3e-125 451.4 304 73.4
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 5.3e-125 451.4 304 73.7
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 6.9e-125 451.1 304 75.7
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 9.0e-125 450.7 304 73.0
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.2e-124 450.3 304 75.0
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.5e-124 449.9 304 73.4
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 2.6e-124 449.1 298 75.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 3.4e-124 448.7 304 73.7
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.9e-123 445.7 304 73.4
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.9e-123 445.7 300 74.0
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 3.8e-123 445.3 304 72.4
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 5.0e-123 444.9 301 73.8
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 5.0e-123 444.9 304 73.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 6.5e-123 444.5 300 73.3
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.4e-120 436.8 300 72.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.3e-120 436.0 304 71.7
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 5.1e-120 434.9 304 70.4
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 6.7e-120 434.5 306 69.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 8.8e-120 434.1 306 69.6
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.1e-119 433.7 306 70.3
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.1e-119 433.7 306 70.3
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 2.5e-119 432.6 306 69.9
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 5.7e-119 431.4 306 69.9
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 5.7e-119 431.4 278 78.8
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.3e-118 430.3 304 71.4
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 3.7e-118 428.7 300 70.3
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 6.3e-118 427.9 306 70.6
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 8.2e-118 427.6 301 69.8
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.4e-117 426.8 302 69.9
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.8e-117 426.4 300 70.7
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 4.1e-117 425.2 299 71.2
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.5e-116 423.3 300 70.7
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.4e-116 422.2 283 75.3
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 7.7e-116 421.0 301 68.8
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.2e-114 415.6 300 69.0
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 7.9e-113 411.0 261 78.9
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.4e-112 410.2 302 66.9
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.6e-111 406.0 304 69.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 5.9e-108 394.8 246 81.3
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.2e-105 387.1 266 74.1
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.6e-103 379.4 258 73.6
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 5.9e-100 368.2 303 61.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.9e-98 363.2 242 73.6
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 9.8e-95 350.9 230 75.2
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 1.2e-92 344.0 265 65.3
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 5.9e-92 341.7 286 60.8
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.1e-90 337.4 256 66.8
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 3.0e-88 329.3 299 56.2
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 5.4e-85 318.5 300 54.7
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 7.0e-85 318.2 293 59.7
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.1e-82 310.8 220 70.9
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.5e-82 309.7 196 78.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.5e-76 289.3 295 51.5
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.5e-74 283.9 196 70.9
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.4e-72 277.3 296 52.0
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 9.2e-69 264.6 307 46.3
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.1e-65 253.4 212 61.3
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.7e-51 207.2 309 41.1
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.6e-51 204.9 143 75.5
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-50 203.8 144 76.4
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 4.7e-49 199.1 301 42.5
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.2e-48 195.7 144 72.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 6.0e-44 182.2 163 52.1
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.0e-43 181.4 144 70.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 8.1e-41 171.8 104 76.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 3.2e-37 159.8 362 31.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.5e-36 156.4 91 76.9
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 5.1e-35 152.5 309 34.0
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.6e-31 140.2 342 29.8
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 7.6e-31 138.7 261 38.7
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.2e-29 132.9 77 76.6
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.0e-14 85.1 54 72.2


User provided reference genes

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