Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.8e-76 289.3 158 100.0
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.2e-51 206.8 154 79.9
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 5.9e-51 204.5 157 73.9
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 5.0e-42 174.9 158 70.9
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 9.2e-36 154.1 158 62.7
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 2.0e-30 136.3 155 61.3
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 1.8e-28 129.8 166 53.0
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 3.5e-27 125.6 154 55.8
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 9.5e-25 117.5 167 49.1
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 1.6e-24 116.7 165 53.9
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.6e-24 116.7 164 48.2
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 3.1e-23 112.5 155 54.2
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 5.2e-23 111.7 159 48.4
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 6.8e-23 111.3 166 48.8
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.5e-22 110.2 164 45.7
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 1.5e-22 110.2 164 45.7
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 2.6e-22 109.4 156 50.6
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 3.4e-22 109.0 154 55.2
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 4.4e-22 108.6 162 51.9
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 7.5e-22 107.8 159 46.5
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 6.4e-21 104.8 168 44.6
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 2.4e-20 102.8 164 47.0
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 4.1e-20 102.1 154 49.4
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 2.7e-19 99.4 158 50.6
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 3.5e-19 99.0 148 47.3
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 6.0e-19 98.2 160 49.4
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 1.0e-18 97.4 165 46.7
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 5.0e-18 95.1 154 51.9
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 5.6e-17 91.7 157 43.9
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 5.6e-17 91.7 175 45.7
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 1.2e-16 90.5 162 43.8
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 2.1e-16 89.7 154 46.8
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 4.7e-16 88.6 161 47.2
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 4.7e-16 88.6 161 46.6
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 1.4e-15 87.0 160 39.4
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 4.0e-15 85.5 159 46.5
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 5.2e-15 85.1 156 37.8
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 8.9e-15 84.3 157 46.5
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 8.9e-15 84.3 154 46.8
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 1.2e-14 84.0 160 45.0
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.0e-14 83.2 157 45.9
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 4.9e-13 78.6 163 46.0
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 8.3e-13 77.8 161 43.5
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 8.3e-13 77.8 161 43.5
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.1e-12 77.4 174 41.4
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.9e-12 76.6 161 42.9
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.9e-12 76.6 156 43.6
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 2.4e-12 76.3 165 42.4
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 4.1e-12 75.5 157 43.3
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 5.4e-12 75.1 122 51.6
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 5.4e-12 75.1 157 43.9
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.2e-11 73.9 159 42.8
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.2e-11 73.9 166 42.8
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 2.1e-11 73.2 159 40.3
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.1e-11 73.2 156 42.9
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 2.1e-11 73.2 149 42.3
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 4.6e-11 72.0 154 43.5
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 1.0e-10 70.9 153 44.4
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.7e-10 70.1 168 38.1
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.7e-10 70.1 162 42.6
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 6.6e-10 68.2 163 41.7
PSO170G2244 Papaver somniferum HOM05D007152 ORTHO05D008912 1.9e-09 66.6 168 38.1
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 3.3e-09 65.9 172 36.6
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 7.3e-09 64.7 165 40.0
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 7.3e-09 64.7 165 40.0
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 2.8e-08 62.8 167 41.3
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.6e-08 62.4 155 37.4
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.6e-08 62.4 152 38.2
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 4.0e-07 58.9 104 50.0
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 4.0e-07 58.9 162 37.0
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.5e-06 57.0 160 43.1
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.4e-06 55.8 160 36.2
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 4.4e-06 55.5 54 55.6
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 9.9e-06 54.3 125 45.6


User provided reference genes

Program Settings