Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25639 Nelumbo nucifera HOM05D001705 ORTHO05D036849 3.2e-17 90.5 41 100.0
Nn5g29993 Nelumbo nucifera HOM05D001705 ORTHO05D036849 3.2e-17 90.5 41 100.0
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 5.7e-14 79.7 40 87.5
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 1.6e-08 61.6 38 68.4
PSO541G4589 Papaver somniferum HOM05D001705 ORTHO05D002725 1.6e-08 61.6 37 70.3
Ah.03g146170 Amaranthus hybridus HOM05D001705 ORTHO05D002725 2.7e-08 60.8 38 63.2
AUR62002982 Chenopodium quinoa HOM05D000312 ORTHO05D002725 2.7e-08 60.8 37 67.6
AUR62007789 Chenopodium quinoa HOM05D000312 ORTHO05D002725 6.1e-08 59.7 37 67.6
Cpa.g.sc6.205 Carica papaya HOM05D001705 ORTHO05D002725 1.4e-07 58.5 40 62.5
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 1.8e-07 58.2 37 64.9
Peaxi162Scf00083g01719 Petunia axillaris HOM05D001705 ORTHO05D002725 1.8e-07 58.2 36 66.7
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 2.3e-07 57.8 36 66.7
PSO675G0217 Papaver somniferum HOM05D001705 ORTHO05D002217 4.0e-07 57.0 37 64.9
PSO541G1422 Papaver somniferum HOM05D001705 ORTHO05D002725 5.2e-07 56.6 37 64.9
PSO541G5796 Papaver somniferum HOM05D001705 ORTHO05D036849 5.2e-07 56.6 37 62.2
Sabra07G0013900 Salix brachista HOM05D001705 ORTHO05D002725 6.7e-07 56.2 38 63.2
Sed0016929 Sechium edule HOM05D001705 ORTHO05D002725 6.7e-07 56.2 40 57.5
Ah.03g141660 Amaranthus hybridus HOM05D003705 ORTHO05D002725 8.8e-07 55.8 38 57.9
AUR62007790 Chenopodium quinoa HOM05D001705 ORTHO05D002725 8.8e-07 55.8 38 63.2
PSO675G6841 Papaver somniferum HOM05D001705 ORTHO05D002725 8.8e-07 55.8 37 62.2
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 1.1e-06 55.5 38 60.5
PSO541G4650 Papaver somniferum HOM05D001705 ORTHO05D002725 1.1e-06 55.5 37 64.9
EL10Ac6g14594 Beta vulgaris HOM05D001705 ORTHO05D002725 1.5e-06 55.1 38 60.5
PSO384G1457 Papaver somniferum HOM05D001705 ORTHO05D002725 2.0e-06 54.7 36 61.1
Ah.08g219840 Amaranthus hybridus HOM05D003705 ORTHO05D007730 2.6e-06 54.3 40 57.5
MSTRG.2503 Avicennia marina HOM05D001705 ORTHO05D002725 2.6e-06 54.3 36 61.1
PSO541G3058 Papaver somniferum HOM05D001705 ORTHO05D002725 2.6e-06 54.3 37 59.5
PSO675G9374 Papaver somniferum HOM05D001705 ORTHO05D002725 2.6e-06 54.3 37 59.5
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 2.6e-06 54.3 38 60.5
EL10Ac6g15676 Beta vulgaris HOM05D001705 ORTHO05D002725 3.3e-06 53.9 37 56.8
Duzib147G0685 Durio zibethinus HOM05D001705 ORTHO05D002725 3.3e-06 53.9 38 60.5
CiPaw.07G055300 Carya illinoinensis HOM05D001705 ORTHO05D002725 5.7e-06 53.1 38 60.5
Cc07_g10340 Coffea canephora HOM05D001705 ORTHO05D002725 5.7e-06 53.1 35 62.9
FAN23G3072 Fragaria x ananassa HOM05D004495 ORTHO05D005361 5.7e-06 53.1 38 57.9
FAN28G1436 Fragaria x ananassa HOM05D001705 ORTHO05D002725 5.7e-06 53.1 38 57.9
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 5.7e-06 53.1 37 62.2
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 5.7e-06 53.1 37 62.2
Rhsim08G0036100 Rhododendron simsii HOM05D001705 ORTHO05D002725 5.7e-06 53.1 36 61.1
FvH4_1g12240 Fragaria vesca HOM05D001705 ORTHO05D002725 7.5e-06 52.8 38 57.9
FAN19G2547 Fragaria x ananassa HOM05D004495 ORTHO05D005361 7.5e-06 52.8 38 57.9
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 7.5e-06 52.8 36 61.1
MELO3C007881.2 Cucumis melo HOM05D001705 ORTHO05D002725 9.7e-06 52.4 37 59.5
CsaV3_6G046840 Cucumis sativus L. HOM05D001705 ORTHO05D002725 9.7e-06 52.4 37 59.5
PSO135G0758 Papaver somniferum HOM05D001705 ORTHO05D002725 9.7e-06 52.4 35 62.9
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 9.7e-06 52.4 38 60.5
vmacro22099 Vaccinium macrocarpon HOM05D001705 ORTHO05D002725 9.7e-06 52.4 38 57.9


User provided reference genes

Program Settings