Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 7.1e-72 274.6 149 100.0
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 2.8e-68 262.7 149 94.0
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 6.2e-68 261.5 149 94.0
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 5.2e-67 258.5 149 92.6
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 8.4e-65 251.1 148 90.5
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 1.6e-63 246.9 148 89.9
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 2.1e-63 246.5 145 92.4
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 2.1e-63 246.5 148 86.5
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 4.6e-63 245.4 148 87.2
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 4.6e-63 245.4 148 85.8
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 6.0e-63 245.0 147 87.1
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 6.0e-63 245.0 148 88.5
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 7.8e-63 244.6 150 88.0
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.0e-62 244.2 148 89.2
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 3.0e-62 242.7 148 86.5
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 3.0e-62 242.7 148 85.8
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 3.9e-62 242.3 144 90.3
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 5.1e-62 241.9 150 86.7
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 6.6e-62 241.5 145 87.6
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 6.6e-62 241.5 147 89.8
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 8.6e-62 241.1 147 88.4
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 1.5e-61 240.4 145 86.9
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.9e-61 240.0 147 88.4
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 2.5e-61 239.6 148 86.5
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 2.5e-61 239.6 148 84.5
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 2.5e-61 239.6 149 85.9
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 2.5e-61 239.6 149 85.9
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 3.3e-61 239.2 148 87.8
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 3.3e-61 239.2 146 89.0
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 3.3e-61 239.2 148 85.8
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 4.3e-61 238.8 148 86.5
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 5.6e-61 238.4 145 84.8
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 5.6e-61 238.4 148 85.1
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 5.6e-61 238.4 146 89.7
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 9.6e-61 237.7 147 88.4
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.6e-60 236.9 147 87.8
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 2.8e-60 236.1 148 85.1
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 2.8e-60 236.1 148 85.1
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 2.8e-60 236.1 145 84.8
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 4.7e-60 235.3 147 87.8
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 6.2e-60 235.0 147 87.1
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 6.2e-60 235.0 147 87.1
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 6.2e-60 235.0 145 89.0
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 6.2e-60 235.0 145 89.0
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 8.1e-60 234.6 146 86.3
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 8.1e-60 234.6 148 85.8
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 1.1e-59 234.2 148 83.1
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 1.1e-59 234.2 147 87.8
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 1.4e-59 233.8 149 85.9
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.4e-59 233.8 145 89.0
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 1.8e-59 233.4 148 85.8
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 2.4e-59 233.0 143 88.1
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 4.0e-59 232.3 148 85.8
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 4.0e-59 232.3 150 84.7
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 5.2e-59 231.9 151 84.1
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 2.0e-58 229.9 149 85.9
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 2.0e-58 229.9 150 84.7
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 2.0e-58 229.9 146 87.0
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 2.6e-58 229.6 143 86.0
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 3.4e-58 229.2 148 83.8
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 3.4e-58 229.2 148 85.1
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 4.4e-58 228.8 148 84.5
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 4.4e-58 228.8 143 86.0
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 5.8e-58 228.4 148 85.1
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 5.8e-58 228.4 148 83.8
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.3e-57 227.3 148 84.5
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 1.3e-57 227.3 145 84.1
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 1.3e-57 227.3 143 85.3
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.7e-57 226.9 145 84.1
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 2.2e-57 226.5 146 85.6
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.9e-57 226.1 148 83.8
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 4.9e-57 225.3 149 85.2
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 4.9e-57 225.3 134 89.6
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 4.9e-57 225.3 149 82.6
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 6.4e-57 224.9 132 91.7
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 8.4e-57 224.6 133 89.5
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 8.4e-57 224.6 148 83.1
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 1.1e-56 224.2 148 81.8
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 1.4e-56 223.8 148 83.1
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.4e-56 223.8 138 87.7
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 1.9e-56 223.4 148 83.1
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.4e-56 223.0 133 88.7
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 2.4e-56 223.0 145 83.4
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 3.2e-56 222.6 147 85.0
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 3.2e-56 222.6 147 84.4
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 3.2e-56 222.6 145 83.4
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 7.1e-56 221.5 143 83.9
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 7.1e-56 221.5 148 84.5
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 7.1e-56 221.5 148 84.5
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 9.3e-56 221.1 141 85.1
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 2.1e-55 219.9 148 81.1
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 2.1e-55 219.9 149 81.2
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 2.7e-55 219.5 148 80.4
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 3.5e-55 219.2 146 81.5
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 3.5e-55 219.2 148 83.8
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 4.6e-55 218.8 148 83.8
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 7.8e-55 218.0 133 88.0
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 1.0e-54 217.6 146 82.9
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 1.3e-54 217.2 148 81.1
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 3.0e-54 216.1 148 82.4
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 6.6e-54 214.9 145 82.8
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 8.7e-54 214.5 148 81.8
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 8.7e-54 214.5 148 81.8
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 1.5e-53 213.8 152 78.3
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 1.5e-53 213.8 152 78.3
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 3.3e-53 212.6 130 88.5
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 5.6e-53 211.8 148 79.1
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 5.6e-53 211.8 148 79.7
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 5.6e-53 211.8 146 81.5
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 9.6e-53 211.1 155 76.1
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 9.6e-53 211.1 136 83.8
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 1.6e-52 210.3 146 80.1
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 2.8e-52 209.5 148 79.1
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 2.8e-52 209.5 148 79.1
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 2.8e-52 209.5 147 79.6
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 2.8e-52 209.5 147 79.6
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 8.1e-52 208.0 147 78.9
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 8.1e-52 208.0 147 78.9
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 8.1e-52 208.0 147 78.9
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 4.0e-51 205.7 139 80.6
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 5.3e-51 205.3 148 78.4
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 1.2e-50 204.1 148 77.7
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 1.2e-50 204.1 144 78.5
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 1.5e-50 203.8 136 83.1
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 1.5e-50 203.8 147 76.9
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 2.0e-50 203.4 148 76.4
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 7.6e-50 201.4 146 76.7
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.7e-49 200.3 148 79.1
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 8.4e-49 198.0 152 78.3
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 5.4e-48 195.3 139 79.1
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 3.9e-46 189.1 139 78.4
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 2.0e-42 176.8 138 71.0
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 2.6e-42 176.4 126 73.8
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 7.6e-42 174.9 131 75.6
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 8.4e-41 171.4 115 87.0
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 3.2e-40 169.5 133 70.7
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.6e-39 167.2 148 68.2
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 3.9e-38 162.5 121 80.2
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 4.5e-34 149.1 135 67.4
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 2.9e-33 146.4 119 69.7
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 1.8e-30 137.1 92 88.0
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 1.8e-30 137.1 128 63.3
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 5.1e-30 135.6 109 72.5
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 5.3e-27 125.6 80 77.5
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 2.0e-26 123.6 113 66.4
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 5.5e-24 115.5 135 53.3
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 4.6e-23 112.5 150 54.0
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 4.6e-23 112.5 108 60.2
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 1.1e-21 107.8 100 64.0
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 8.2e-20 101.7 72 81.9
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 8.2e-20 101.7 72 81.9
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 1.1e-19 101.3 87 73.6
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.1e-16 91.3 66 87.9
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 2.5e-16 90.1 72 76.4
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 9.4e-16 88.2 64 85.9
Dinv15195 Davidia involucrata HOM05D002174 ORTHO05D005447 4.2e-08 62.8 51 62.7
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 1.2e-07 61.2 59 44.1


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