Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25534 Nelumbo nucifera HOM05D009814 ORTHO05D004310 3.8e-85 318.9 278 100.0
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 1.3e-24 117.9 223 63.2
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 6.3e-24 115.5 223 61.4
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.8e-23 114.0 220 63.2
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.6e-17 93.6 106 54.7
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.6e-14 84.3 218 55.5
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 6.0e-14 82.4 231 38.1
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 1.5e-12 77.8 220 56.8
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 7.3e-12 75.5 223 57.4
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 9.5e-12 75.1 233 52.8
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.8e-11 73.6 232 53.0
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 3.6e-11 73.2 232 50.9
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 8.0e-11 72.0 228 52.6
Aqoxy6G01340 Aquilegia oxysepala HOM05D009814 ORTHO05D004310 2.3e-10 70.5 99 46.5
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 2.3e-10 70.5 228 52.2
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 2.3e-10 70.5 228 52.2
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 4.0e-10 69.7 214 55.1
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 5.2e-10 69.3 223 52.9
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 5.2e-10 69.3 229 55.9
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.4e-09 66.6 222 58.1
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 1.3e-08 64.7 218 49.5
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 2.2e-08 63.9 220 52.7
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 2.2e-08 63.9 222 53.6
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 2.9e-08 63.5 218 53.2
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 6.4e-08 62.4 104 41.3
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.9e-07 60.8 231 54.1
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 2.4e-07 60.5 223 52.5
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 2.4e-07 60.5 218 47.7
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 4.1e-07 59.7 218 34.9
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 5.4e-07 59.3 219 50.2
PSO210G0186 Papaver somniferum HOM05D058645 ORTHO05D004310 5.4e-07 59.3 220 50.5
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 7.1e-07 58.9 230 27.8
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 7.1e-07 58.9 223 50.7
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 9.2e-07 58.5 214 56.1
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 9.2e-07 58.5 220 55.9
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 1.6e-06 57.8 182 58.2
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.6e-06 57.8 197 54.3
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.7e-06 57.0 218 54.1
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 3.5e-06 56.6 215 55.8
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 3.5e-06 56.6 219 52.5
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 3.5e-06 56.6 219 41.1
PSO761G0298 Papaver somniferum HOM05D058645 ORTHO05D004310 4.6e-06 56.2 220 49.5
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 7.8e-06 55.5 225 52.4
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 7.8e-06 55.5 229 50.7


User provided reference genes

Program Settings