Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25441 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.3e-55 219.5 112 100.0
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 2.4e-14 82.4 105 46.7
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.1e-11 73.6 83 49.4
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 1.1e-11 73.6 83 49.4
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 9.4e-11 70.5 118 34.7
Gohir.D08G050000 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.6e-10 69.7 101 44.6
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 1.6e-10 69.7 102 43.1
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 2.1e-10 69.3 98 44.9
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 2.1e-10 69.3 115 39.1
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 2.7e-10 68.9 105 43.8
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 4.7e-10 68.2 115 40.0
Gohir.A08G039900 Gossypium hirsutum HOM05D008325 ORTHO05D010336 6.1e-10 67.8 102 43.1
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 8.0e-10 67.4 86 46.5
Duzib211G0526 Durio zibethinus HOM05D008325 ORTHO05D010336 4.0e-09 65.1 84 45.2
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 4.0e-09 65.1 115 41.7
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 5.2e-09 64.7 123 41.5
Manes.05G011600 Manihot esculenta HOM05D008325 ORTHO05D010336 8.8e-09 63.9 100 40.0
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 1.5e-08 63.2 113 39.8
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 2.0e-08 62.8 118 36.4
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 2.6e-08 62.4 98 43.9
Actinidia01668 Actinidia chinensis HOM05D009264 ORTHO05D009202 3.4e-08 62.0 113 38.9
Oeu038060.1 Olea europaea HOM05D008325 ORTHO05D010336 4.4e-08 61.6 125 38.4
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 7.5e-08 60.8 116 39.7
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 1.3e-07 60.1 101 39.6
Nn3g21852 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.3e-07 60.1 101 41.6
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 1.7e-07 59.7 117 39.3
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 2.8e-07 58.9 108 39.8
Cfa006734 Carpinus fangiana HOM05D009264 ORTHO05D009202 3.7e-07 58.5 105 40.0
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 8.3e-07 57.4 123 38.2
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 1.4e-06 56.6 111 39.6
SalBow7G0413 Salvia bowleyana HOM05D009264 ORTHO05D009202 1.4e-06 56.6 111 36.9
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 2.4e-06 55.8 97 38.1
Aqoxy2G02597 Aquilegia oxysepala HOM05D009264 ORTHO05D009202 3.1e-06 55.5 119 37.0
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 4.1e-06 55.1 110 36.4
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 4.1e-06 55.1 111 37.8
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 5.4e-06 54.7 66 48.5
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 5.4e-06 54.7 98 40.8
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 7.0e-06 54.3 114 35.1
Oeu009100.1 Olea europaea HOM05D007843 ORTHO05D003639 7.0e-06 54.3 92 37.0
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 9.1e-06 53.9 118 34.7


User provided reference genes

Program Settings