Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn064s42221 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.3e-30 133.3 69 100.0
Nn349s46475 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.3e-30 133.3 69 100.0
Nn403s46571 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.3e-30 133.3 69 100.0
Nn4g25379 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.3e-30 133.3 69 100.0
Nn031s41606 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-28 128.6 70 98.6
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 1.7e-26 122.1 68 94.1
Gohir.A12G165450 Gossypium hirsutum HOM05D004182 ORTHO05D007321 3.8e-26 120.9 69 92.8
Nn219s45281 Nelumbo nucifera HOM05D004182 ORTHO05D007321 3.8e-26 120.9 62 100.0
Nn442s46688 Nelumbo nucifera HOM05D004182 ORTHO05D007321 3.8e-26 120.9 62 100.0
BcaC04g20782 Brassica carinata HOM05D004182 ORTHO05D007321 8.4e-26 119.8 69 92.8
CARHR282390 Cardamine hirsuta HOM05D004182 ORTHO05D007321 8.4e-26 119.8 69 92.8
CARHR282490 Cardamine hirsuta HOM05D004182 ORTHO05D007321 8.4e-26 119.8 69 92.8
BolSC29t60499H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BolSC47t61059H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-25 119.4 68 92.6
Gohir.1Z051066 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.1e-25 119.4 69 92.8
Gohir.A04G039255 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.1e-25 119.4 69 92.8
Gohir.1Z049982 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.4e-25 119.0 69 91.3
Sopen06g015050 Solanum pennellii HOM05D004182 ORTHO05D007321 1.4e-25 119.0 69 92.8
Sopen09g020810 Solanum pennellii HOM05D004182 ORTHO05D007321 1.4e-25 119.0 69 92.8
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.9e-25 118.6 68 91.2
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.9e-25 118.6 68 91.2
arahy.Tifrunner.gnm1.ann1.TV6F30 Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-25 118.6 68 91.2
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 1.9e-25 118.6 68 89.7
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 1.9e-25 118.6 68 89.7
EL10Ac7g17372 Beta vulgaris HOM05D004182 ORTHO05D007321 2.4e-25 118.2 69 91.3
EL10As10g23966 Beta vulgaris HOM05D004182 ORTHO05D007321 2.4e-25 118.2 69 91.3
arahy.Tifrunner.gnm1.ann1.73L6LP Arachis hypogaea HOM05D004182 ORTHO05D007321 3.2e-25 117.9 69 89.9
arahy.Tifrunner.gnm1.ann1.UTH6FS Arachis hypogaea HOM05D004182 ORTHO05D007321 4.1e-25 117.5 69 89.9
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 5.4e-25 117.1 68 91.2
arahy.Tifrunner.gnm1.ann1.04MME8 Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-24 115.9 68 89.7
arahy.Tifrunner.gnm1.ann1.MI7UCB Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-24 115.9 68 89.7
arahy.Tifrunner.gnm1.ann1.NV4G0I Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-24 115.9 69 89.9
BraSC58t46455Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-24 115.2 68 89.7
Psat7g033600 Pisum sativum HOM05D004182 ORTHO05D007321 2.1e-24 115.2 69 89.9
Hma1.2p1_1418F.1_g282260 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 4.6e-24 114.0 69 88.4
Lsat_1_v5_gn_0_47640 Lactuca sativa HOM05D004182 ORTHO05D007321 6.0e-24 113.6 69 89.9
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 6.0e-24 113.6 68 88.2
Sopen10g016590 Solanum pennellii HOM05D004182 ORTHO05D007321 1.0e-23 112.8 69 88.4
BraSC179t45780Z Brassica rapa HOM05D004182 ORTHO05D007321 1.7e-23 112.1 64 92.2
Psat0s2011g0080 Pisum sativum HOM05D004182 ORTHO05D007321 8.6e-23 109.8 67 86.6
Nn070s42382 Nelumbo nucifera HOM05D004182 ORTHO05D007321 3.3e-22 107.8 58 94.8
Hma1.2p1_0043F.1_g025830 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 9.6e-22 106.3 68 79.4
arahy.Tifrunner.gnm1.ann1.8WTZ4N Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-21 105.9 63 88.9
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 1.6e-21 105.5 69 82.6
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 2.1e-21 105.1 68 82.4
CARHR044290 Cardamine hirsuta HOM05D004182 ORTHO05D007321 8.1e-21 103.2 61 88.5
Nn029s41584 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-20 102.1 58 89.7
Nn212s45203 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-20 102.1 58 89.7
Nn264s45947 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-20 102.1 58 89.7
Nn304s46229 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-20 102.1 58 89.7
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 2.4e-20 101.7 68 80.9
Gohir.D05G169433 Gossypium hirsutum HOM05D004182 ORTHO05D007321 2.4e-20 101.7 69 82.6
Glyma.09G133950 Glycine max HOM05D004182 ORTHO05D007321 4.0e-20 100.9 69 75.4
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 4.0e-20 100.9 68 79.4
EL10Ac8g19701 Beta vulgaris HOM05D004182 ORTHO05D007321 8.9e-20 99.8 63 85.7
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 2.0e-19 98.6 57 89.5
Sed0007203 Sechium edule HOM05D004182 ORTHO05D007321 3.4e-19 97.8 69 79.7
Sed0018388 Sechium edule HOM05D004182 ORTHO05D007321 3.4e-19 97.8 69 79.7
Sed0018833 Sechium edule HOM05D004182 ORTHO05D007321 3.4e-19 97.8 69 79.7
Sed0022676 Sechium edule HOM05D004182 ORTHO05D007321 3.4e-19 97.8 69 79.7
PGSC0003DMG400043035 Solanum tuberosum HOM05D004182 ORTHO05D007321 4.4e-19 97.4 63 87.3
Hma1.2p1_0594F.1_g185812 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 5.8e-19 97.1 68 77.9
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 7.6e-19 96.7 68 77.9
SHI36542 Sapria himalayana HOM05D004182 ORTHO05D007321 1.3e-18 95.9 69 76.8
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.7e-18 95.5 68 77.9
Gohir.D13G041550 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.7e-18 95.5 69 76.8
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 2.2e-18 95.1 67 79.1
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 2.2e-18 95.1 67 77.6
Sc14g0004760 Simmondsia chinensis HOM05D004182 ORTHO05D007321 3.8e-18 94.4 63 84.1
arahy.Tifrunner.gnm1.ann1.GMF9U8 Arachis hypogaea HOM05D004182 ORTHO05D007321 6.4e-18 93.6 68 76.5
Glyma.09G164000 Glycine max HOM05D004182 ORTHO05D007321 1.4e-17 92.4 55 87.3
Cpa.g.c43052.1 Carica papaya HOM05D004182 ORTHO05D007321 1.9e-17 92.0 58 84.5
Sc03g0005670 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.9e-17 92.0 58 84.5
Sc21g0003840 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.9e-17 92.0 58 84.5
HPP92_028384 Vanilla planifolia HOM05D004182 ORTHO05D007321 4.2e-17 90.9 49 98.0
HPP92_028405 Vanilla planifolia HOM05D004182 ORTHO05D007321 4.2e-17 90.9 49 98.0
HPP92_028414 Vanilla planifolia HOM05D004182 ORTHO05D007321 4.2e-17 90.9 49 98.0
HPP92_028420 Vanilla planifolia HOM05D004182 ORTHO05D007321 4.2e-17 90.9 49 98.0
HPP92_028429 Vanilla planifolia HOM05D004182 ORTHO05D007321 4.2e-17 90.9 49 98.0
HPP92_028433 Vanilla planifolia HOM05D004182 ORTHO05D007321 4.2e-17 90.9 49 98.0
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 5.4e-17 90.5 58 82.8
Phvul.010G003500 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 7.1e-17 90.1 69 72.5
PGSC0003DMG400027964 Solanum tuberosum HOM05D004182 ORTHO05D007321 9.3e-17 89.7 59 83.1
PGSC0003DMG400027965 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.2e-16 89.4 58 82.8
PGSC0003DMG400041917 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.2e-16 89.4 58 82.8
Sed0024115 Sechium edule HOM05D004182 ORTHO05D007321 2.1e-16 88.6 69 73.9
Nn6g32823 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.7e-16 88.2 65 76.9
arahy.Tifrunner.gnm1.ann1.5LT2YD Arachis hypogaea HOM05D000580 ORTHO05D007321 6.0e-16 87.0 65 72.3
Nn8g40575 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.3e-15 85.9 48 91.7
arahy.Tifrunner.gnm1.ann1.096T0J Arachis hypogaea HOM05D004182 ORTHO05D007321 3.9e-15 84.3 67 67.2
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 6.6e-15 83.6 49 89.8
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.1e-14 82.8 58 77.6
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 2.5e-14 81.6 45 91.1
Phvul.010G035850 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 4.3e-14 80.9 51 82.4
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 5.6e-14 80.5 45 88.9
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 9.6e-14 79.7 43 93.0
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 6.2e-13 77.0 46 89.1
Sed0012210 Sechium edule HOM05D004182 ORTHO05D007321 1.4e-12 75.9 69 66.7
CAN.G1119.15 Capsicum annuum HOM05D002978 ORTHO05D003339 2.6e-11 71.6 62 66.1
BcaC05g26432 Brassica carinata HOM05D004182 ORTHO05D007321 3.8e-10 67.8 58 67.2
Phvul.003G041600 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 6.4e-10 67.0 49 75.5
Phvul.010G068400 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 1.1e-09 66.2 48 77.1
Psat3g186560 Pisum sativum HOM05D001387 ORTHO05D001250 5.4e-09 63.9 48 75.0
ECA247G0006 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-08 62.8 38 84.2
Glyma.03G084500 Glycine max HOM05D004182 ORTHO05D007321 1.6e-08 62.4 43 81.4
Migut.I00342 Erythranthe guttata HOM05D004182 ORTHO05D007321 4.6e-08 60.8 38 89.5
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 6.7e-07 57.0 38 84.2
Cpa.g.sc76.14 Carica papaya HOM05D004182 ORTHO05D007321 2.5e-06 55.1 33 78.8
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 4.3e-06 54.3 36 86.1


User provided reference genes

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