Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 7.7e-37 156.8 86 100.0
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.4e-16 88.2 85 57.6
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 5.7e-16 87.4 88 59.1
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 8.3e-15 83.6 87 54.0
Nn3g21957 Nelumbo nucifera HOM05D002165 ORTHO05D001531 9.1e-14 80.1 88 52.3
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 1.6e-13 79.3 90 53.3
Aqoxy2G02476 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.9e-12 75.1 81 50.6
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 2.5e-11 72.0 83 48.2
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.5e-11 72.0 85 51.8
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 5.5e-11 70.9 83 50.6
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 5.5e-11 70.9 83 50.6
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 5.5e-11 70.9 83 50.6
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 5.5e-11 70.9 83 50.6
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 5.5e-11 70.9 83 50.6
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 5.5e-11 70.9 83 50.6
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 9.5e-11 70.1 76 52.6
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 9.5e-11 70.1 76 51.3
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 9.5e-11 70.1 76 51.3
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 9.5e-11 70.1 76 51.3
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 9.5e-11 70.1 83 50.6
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.6e-10 69.3 83 51.8
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 2.1e-10 68.9 83 53.0
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 2.1e-10 68.9 83 50.6
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 2.8e-10 68.6 83 49.4
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 2.8e-10 68.6 83 49.4
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 2.8e-10 68.6 83 49.4
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 3.6e-10 68.2 85 55.3
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-09 66.6 83 47.0
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 1.0e-09 66.6 82 50.0
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 1.8e-09 65.9 83 47.0
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 1.8e-09 65.9 83 47.0
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 1.8e-09 65.9 83 47.0
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 1.8e-09 65.9 83 47.0
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 1.8e-09 65.9 83 47.0
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.8e-09 65.9 83 47.0
Lalb_Chr11g0073691 Lupinus albus HOM05D002165 ORTHO05D001531 1.8e-09 65.9 73 54.8
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 2.3e-09 65.5 75 56.0
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 5.2e-09 64.3 81 48.1
Glyma.15G185700 Glycine max HOM05D002165 ORTHO05D001531 5.2e-09 64.3 41 73.2
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 6.8e-09 63.9 81 51.9
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 6.8e-09 63.9 84 48.8
Glyma.09G080700 Glycine max HOM05D002165 ORTHO05D001531 6.8e-09 63.9 41 73.2
Phvul.009G221200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 6.8e-09 63.9 57 59.6
Phvul.009G221300 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 6.8e-09 63.9 57 59.6
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 8.9e-09 63.5 83 49.4
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 8.9e-09 63.5 83 49.4
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 8.9e-09 63.5 83 49.4
Glyma.09G080800 Glycine max HOM05D002165 ORTHO05D001531 8.9e-09 63.5 45 68.9
Glyma.15G185600 Glycine max HOM05D002165 ORTHO05D001531 8.9e-09 63.5 52 61.5
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 8.9e-09 63.5 83 50.6
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 8.9e-09 63.5 71 52.1
Medtr2g044960 Medicago truncatula HOM05D002165 ORTHO05D001531 8.9e-09 63.5 57 59.6
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.5e-08 62.8 78 48.7
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 1.5e-08 62.8 79 54.4
Lalb_Chr11g0073741 Lupinus albus HOM05D002165 ORTHO05D001531 2.0e-08 62.4 71 53.5
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 2.0e-08 62.4 87 47.1
HPP92_027403 Vanilla planifolia HOM05D023939 ORTHO05D018066 2.0e-08 62.4 53 58.5
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 2.0e-08 62.4 78 50.0
A01p30200 Brassica napus HOM05D002165 ORTHO05D001531 2.6e-08 62.0 83 47.0
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 2.6e-08 62.0 78 48.7
Potri.010G003900 Populus trichocarpa HOM05D002165 ORTHO05D001531 2.6e-08 62.0 89 51.7
TPR.G29235 Trifolium pratense HOM05D002165 ORTHO05D001531 2.6e-08 62.0 76 50.0
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 3.4e-08 61.6 83 45.8
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 3.4e-08 61.6 83 45.8
Psat1g017000 Pisum sativum HOM05D002165 ORTHO05D001531 3.4e-08 61.6 43 69.8
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 3.4e-08 61.6 71 54.9
Sc25g0001810 Simmondsia chinensis HOM05D002165 ORTHO05D001531 3.4e-08 61.6 77 48.1
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 4.4e-08 61.2 69 47.8
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 4.4e-08 61.2 69 49.3
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 4.4e-08 61.2 83 45.8
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 4.4e-08 61.2 83 45.8
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 4.4e-08 61.2 69 49.3
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 4.4e-08 61.2 81 53.1
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 4.4e-08 61.2 81 53.1
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.7e-08 60.8 86 44.2
Lalb_Chr08g0232971 Lupinus albus HOM05D002165 ORTHO05D001531 5.7e-08 60.8 41 68.3
Medtr2g044970 Medicago truncatula HOM05D002165 ORTHO05D001531 5.7e-08 60.8 41 70.7
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 7.5e-08 60.5 75 46.7
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 7.5e-08 60.5 75 46.7
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.5e-08 60.5 87 42.5
DCAR_002558 Daucus carota HOM05D002165 ORTHO05D001531 9.8e-08 60.1 75 48.0
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.8e-08 60.1 87 42.5
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.8e-08 60.1 85 42.4
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.8e-08 60.1 85 42.4
MBI19_g04832_MAGBIO Magnolia biondii HOM05D002165 ORTHO05D001531 9.8e-08 60.1 88 39.8
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 9.8e-08 60.1 81 51.9
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.3e-07 59.7 50 60.0
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.3e-07 59.7 82 43.9
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.3e-07 59.7 82 43.9
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.3e-07 59.7 86 43.0
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.3e-07 59.7 86 43.0
Medtr4g124220 Medicago truncatula HOM05D002165 ORTHO05D001531 1.3e-07 59.7 41 68.3
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-07 59.3 85 43.5
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.2e-07 58.9 87 39.1
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 2.2e-07 58.9 75 46.7
Glyma.15G185400 Glycine max HOM05D002165 ORTHO05D001531 2.8e-07 58.5 79 44.3
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.7e-07 58.2 85 47.1
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.7e-07 58.2 86 43.0
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.7e-07 58.2 86 43.0
Psat1g016840 Pisum sativum HOM05D002165 ORTHO05D001531 3.7e-07 58.2 75 48.0
AL1G54930 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.9e-07 57.8 82 45.1
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.9e-07 57.8 92 42.4
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.9e-07 57.8 92 42.4
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.9e-07 57.8 92 42.4
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 8.3e-07 57.0 84 44.0
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 8.3e-07 57.0 84 44.0
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.3e-07 57.0 86 40.7
Lalb_Chr11g0073711 Lupinus albus HOM05D002165 ORTHO05D001531 8.3e-07 57.0 43 62.8
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 1.1e-06 56.6 80 46.2
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.4e-06 56.2 47 66.0
Os04g0466000 Oryza sativa ssp. japonica HOM05D023939 ORTHO05D018066 1.4e-06 56.2 60 50.0
TPR.G29438 Trifolium pratense HOM05D002165 ORTHO05D001531 1.4e-06 56.2 38 73.7
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 1.8e-06 55.8 40 65.0
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.8e-06 55.8 61 57.4
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 1.8e-06 55.8 42 64.3
Sabra10G0003300 Salix brachista HOM05D002165 ORTHO05D001531 1.8e-06 55.8 55 56.4
CiPaw.02G068700 Carya illinoinensis HOM05D002165 ORTHO05D001531 2.4e-06 55.5 48 54.2
Lalb_Chr11g0073721 Lupinus albus HOM05D002165 ORTHO05D001531 2.4e-06 55.5 43 62.8
Zm00001eb080340 Zea mays HOM05D023939 ORTHO05D018066 2.4e-06 55.5 67 49.3
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.1e-06 55.1 90 41.1
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 3.1e-06 55.1 87 40.2
DCAR_023419 Daucus carota HOM05D002165 ORTHO05D001531 4.1e-06 54.7 66 50.0
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 4.1e-06 54.7 85 44.7
Phvul.009G221100 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 4.1e-06 54.7 79 46.8
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 7.0e-06 53.9 38 68.4
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 7.0e-06 53.9 87 42.5
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 7.0e-06 53.9 42 61.9
RcHm_v2.0_Chr4g0427981 Rosa chinensis HOM05D002165 ORTHO05D001531 7.0e-06 53.9 43 58.1
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 9.2e-06 53.5 84 47.6
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 9.2e-06 53.5 90 38.9
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 9.2e-06 53.5 86 38.4


User provided reference genes

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