Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 6.1e-130 467.6 257 100.0
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 9.0e-57 224.6 122 89.3
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.8e-28 130.6 116 60.3
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 5.7e-27 125.6 105 55.2
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 9.1e-25 118.2 110 53.6
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 5.9e-24 115.5 103 56.3
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 7.7e-24 115.2 115 51.3
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 7.7e-24 115.2 119 55.5
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.2e-23 113.6 120 54.2
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 2.9e-23 113.2 125 55.2
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 3.8e-23 112.8 117 52.1
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 3.8e-23 112.8 115 53.0
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 5.0e-23 112.5 113 53.1
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 5.0e-23 112.5 115 52.2
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 1.9e-22 110.5 107 55.1
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 3.2e-22 109.8 113 52.2
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 3.2e-22 109.8 108 54.6
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 4.2e-22 109.4 113 52.2
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 4.2e-22 109.4 87 62.1
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 1.2e-21 107.8 117 51.3
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 2.7e-21 106.7 117 49.6
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 2.7e-21 106.7 111 52.3
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 3.6e-21 106.3 113 50.4
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 7.9e-21 105.1 110 52.7
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 1.8e-20 104.0 113 49.6
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 3.0e-20 103.2 111 48.6
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 6.7e-20 102.1 111 50.5
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 8.8e-20 101.7 118 47.5
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.1e-19 101.3 123 48.0
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 1.5e-19 100.9 117 47.9
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 3.3e-19 99.8 78 57.7
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 1.3e-18 97.8 119 46.2
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.7e-18 97.4 123 47.2
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.7e-18 97.4 123 47.2
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.7e-18 96.3 125 46.4
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.8e-18 95.9 123 46.3
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 8.2e-18 95.1 109 47.7
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 2.4e-17 93.6 129 45.0
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 2.4e-17 93.6 116 44.0
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 3.1e-17 93.2 116 49.1
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 3.1e-17 93.2 121 47.1
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 4.1e-17 92.8 116 49.1
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 4.1e-17 92.8 123 42.3
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 5.3e-17 92.4 116 44.0
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 5.3e-17 92.4 125 40.0
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 5.3e-17 92.4 124 47.6
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 5.3e-17 92.4 113 48.7
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.3e-17 92.4 107 48.6
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 6.9e-17 92.0 124 40.3
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 9.1e-17 91.7 104 48.1
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 9.1e-17 91.7 124 41.9
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 9.1e-17 91.7 112 50.0
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 2.0e-16 90.5 116 45.7
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 2.0e-16 90.5 79 50.6
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 3.4e-16 89.7 125 39.2
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.5e-16 89.4 121 46.3
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 4.5e-16 89.4 119 45.4
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.9e-16 89.0 123 45.5
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 5.9e-16 89.0 123 45.5
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 5.9e-16 89.0 123 45.5
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 7.7e-16 88.6 125 38.4
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.7e-16 88.6 123 45.5
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.7e-16 88.6 123 45.5
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.3e-15 87.8 123 39.0
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 1.3e-15 87.8 78 56.4
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 1.3e-15 87.8 119 44.5
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 1.3e-15 87.8 108 48.1
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.3e-15 87.8 79 50.6
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 2.2e-15 87.0 83 55.4
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.2e-15 87.0 123 45.5
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 2.2e-15 87.0 126 39.7
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 2.9e-15 86.7 126 39.7
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 3.8e-15 86.3 126 39.7
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 3.8e-15 86.3 126 39.7
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 5.0e-15 85.9 114 45.6
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 6.5e-15 85.5 126 39.7
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 8.5e-15 85.1 124 38.7
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 8.5e-15 85.1 124 38.7
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 8.5e-15 85.1 124 38.7
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.1e-14 84.7 120 40.0
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 1.4e-14 84.3 123 38.2
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 2.5e-14 83.6 126 38.9
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 3.2e-14 83.2 101 43.6
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 3.2e-14 83.2 120 38.3
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 7.2e-14 82.0 110 43.6
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 1.2e-13 81.3 99 43.4
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 1.6e-13 80.9 54 68.5
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 2.1e-13 80.5 111 40.5
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 2.1e-13 80.5 120 42.5
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 2.7e-13 80.1 110 43.6
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.0e-12 78.2 78 47.4
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.4e-12 77.8 104 44.2
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 3.0e-12 76.6 68 57.4
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 1.1e-11 74.7 61 60.7
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 1.1e-11 74.7 114 42.1
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.0e-11 73.9 55 61.8
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 5.7e-11 72.4 115 41.7
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 7.4e-11 72.0 108 38.9
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 1.7e-10 70.9 114 38.6
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 2.2e-10 70.5 102 42.2
HPP92_020058 Vanilla planifolia HOM05D003240 ORTHO05D009426 9.4e-06 55.1 102 34.3


User provided reference genes

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