Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.4e-111 405.6 214 100.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 2.5e-36 156.4 129 67.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 7.3e-36 154.8 131 64.1
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 2.0e-33 146.7 129 63.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 4.4e-33 145.6 129 62.0
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 5.8e-33 145.2 130 61.5
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 9.8e-33 144.4 129 62.8
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 9.8e-33 144.4 125 63.2
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 2.2e-32 143.3 129 61.2
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.4e-31 140.6 130 59.2
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-31 140.2 125 64.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.9e-31 140.2 125 64.8
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.4e-31 139.8 128 60.9
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 2.4e-31 139.8 97 72.2
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 5.4e-31 138.7 130 60.8
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 7.0e-31 138.3 127 60.6
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.6e-30 137.1 126 61.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-30 136.7 131 61.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.0e-30 136.7 130 60.0
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-30 136.3 130 60.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-30 136.3 131 55.0
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-30 136.3 131 55.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.7e-30 136.3 131 55.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 3.5e-30 136.0 127 58.3
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 3.5e-30 136.0 131 59.5
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.5e-30 136.0 114 62.3
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.6e-30 135.6 95 73.7
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 4.6e-30 135.6 132 61.4
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 6.0e-30 135.2 120 64.2
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 6.0e-30 135.2 130 59.2
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 6.0e-30 135.2 130 59.2
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 7.8e-30 134.8 132 59.8
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 7.8e-30 134.8 130 60.8
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 7.8e-30 134.8 120 63.3
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.0e-29 134.4 113 62.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.3e-29 134.0 131 54.2
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.3e-29 134.0 131 54.2
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.3e-29 133.3 136 56.6
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.3e-29 133.3 112 65.2
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.0e-29 132.9 131 58.0
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 3.0e-29 132.9 128 60.2
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.0e-29 132.9 129 57.4
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 6.6e-29 131.7 130 53.1
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 8.6e-29 131.3 132 56.1
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.1e-28 131.0 128 55.5
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.5e-28 130.6 130 57.7
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.5e-28 130.6 111 61.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.5e-28 130.6 130 57.7
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.5e-28 130.6 130 57.7
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.9e-28 130.2 118 62.7
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.9e-28 130.2 131 55.7
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 2.5e-28 129.8 135 54.1
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.5e-28 129.8 124 60.5
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.3e-28 129.4 125 60.8
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.3e-28 129.4 125 62.4
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 4.3e-28 129.0 136 55.9
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 4.3e-28 129.0 127 58.3
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 5.6e-28 128.6 128 57.0
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.6e-28 128.6 129 55.8
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 7.3e-28 128.3 136 55.1
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 7.3e-28 128.3 125 61.6
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.2e-27 127.5 126 56.3
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.6e-27 127.1 123 60.2
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.6e-27 127.1 126 56.3
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.8e-27 126.3 126 56.3
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 3.6e-27 125.9 136 53.7
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 3.6e-27 125.9 127 57.5
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.6e-27 125.9 123 52.8
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.6e-27 125.9 129 55.8
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 4.7e-27 125.6 98 62.2
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 4.7e-27 125.6 110 60.0
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 6.2e-27 125.2 130 54.6
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 8.1e-27 124.8 129 53.5
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 8.1e-27 124.8 121 58.7
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.1e-26 124.4 133 52.6
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.1e-26 124.4 119 58.8
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.1e-26 124.4 131 53.4
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 2.3e-26 123.2 127 59.8
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.3e-26 123.2 109 58.7
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.1e-26 122.9 98 61.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 3.1e-26 122.9 131 55.0
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 4.0e-26 122.5 106 62.3
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 4.0e-26 122.5 130 53.1
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 5.2e-26 122.1 110 59.1
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 8.9e-26 121.3 129 54.3
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.9e-26 121.3 97 59.8
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.5e-25 120.6 131 53.4
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 2.6e-25 119.8 120 55.0
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 2.6e-25 119.8 120 55.0
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 3.4e-25 119.4 123 55.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.3e-24 117.5 120 59.2
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 2.9e-24 116.3 125 52.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.9e-24 115.5 160 43.1
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.4e-24 115.2 100 56.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.4e-24 115.2 138 51.4
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 4.1e-23 112.5 124 53.2
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.4e-23 112.1 89 61.8
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 7.1e-23 111.7 129 48.8
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 9.2e-23 111.3 143 51.0
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.2e-22 110.9 135 44.4
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 2.1e-22 110.2 134 48.5
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.1e-22 110.2 129 48.8
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 4.6e-22 109.0 87 60.9
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.3e-21 106.7 136 46.3
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.0e-21 106.3 104 53.8
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 6.6e-21 105.1 109 48.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 6.6e-21 105.1 134 45.5
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.3e-20 102.4 127 44.9
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 7.3e-20 101.7 88 58.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.3e-20 101.7 103 55.3
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 2.1e-19 100.1 106 52.8
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.1e-18 96.3 69 72.5
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 5.2e-18 95.5 111 45.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 6.8e-18 95.1 173 37.0
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.2e-17 94.4 107 45.8
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.4e-17 92.8 114 52.6
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-16 90.9 69 71.0
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.1e-14 83.6 85 49.4
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 3.5e-14 82.8 81 48.1
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 3.5e-14 82.8 106 41.5
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 4.6e-14 82.4 82 61.0
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.5e-12 77.4 87 58.6
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 9.6e-12 74.7 120 38.3
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.0e-09 67.0 112 34.8
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 5.4e-07 58.9 44 59.1
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 5.4e-07 58.9 44 59.1


User provided reference genes

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