Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 5.0e-293 1010.4 509 100.0
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.7e-180 634.8 510 64.1
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 3.8e-176 622.1 439 69.5
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 8.5e-176 620.9 493 62.7
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 8.0e-174 614.4 461 66.2
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 2.3e-173 612.8 463 65.0
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 8.8e-173 610.9 487 61.6
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 1.7e-171 606.7 499 61.5
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 1.1e-170 604.0 457 66.7
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 1.8e-170 603.2 471 63.5
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 1.1e-167 594.0 487 60.4
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 3.2e-167 592.4 453 64.7
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 3.6e-166 589.0 511 58.7
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 5.2e-165 585.1 460 63.3
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 8.8e-165 584.3 458 61.4
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 2.0e-164 583.2 464 61.2
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 9.8e-164 580.9 460 60.7
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 1.4e-162 577.0 462 60.4
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 4.1e-162 575.5 465 63.2
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 1.6e-161 573.5 462 59.5
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 4.2e-159 565.5 458 59.8
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 7.2e-159 564.7 453 60.9
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 2.1e-158 563.1 456 60.3
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 5.0e-152 542.0 412 64.3
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.3e-147 527.3 508 53.7
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.9e-147 525.4 473 55.8
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 4.9e-147 525.4 508 53.5
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 2.6e-140 503.1 477 55.1
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 8.3e-139 498.0 498 53.0
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 1.6e-121 440.7 309 68.9
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 2.8e-110 403.3 513 46.6
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 3.4e-108 396.4 497 44.3
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 1.7e-107 394.0 463 44.5
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 2.5e-103 380.2 401 51.9
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 4.6e-89 332.8 434 43.5
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 2.5e-87 327.0 257 61.9
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 6.9e-85 318.9 238 63.4
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.2e-70 270.8 232 62.1
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.1e-63 248.4 245 50.2
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.1e-63 248.4 245 50.2
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.4e-63 246.5 183 67.8
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 3.5e-60 236.9 185 61.1
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.8e-59 233.4 178 65.7
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.0e-59 233.0 178 65.2
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 1.9e-58 231.1 222 55.4
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.4e-58 228.8 178 65.2
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.0e-56 223.8 170 66.5
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.4e-55 219.9 170 67.6
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 2.2e-54 217.6 492 34.3
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 3.7e-54 216.9 318 43.7
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 1.4e-53 214.9 187 58.3
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.1e-53 212.2 163 65.0
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.3e-46 191.8 177 56.5
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 3.1e-45 187.2 265 43.0
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.0e-43 182.2 179 52.5
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.8e-43 180.3 138 64.5
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.0e-43 179.9 138 64.5
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.6e-43 179.1 121 71.9
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.2e-41 175.3 240 42.5
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.0e-35 155.6 159 51.6
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.3e-26 123.6 128 52.3
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.4e-24 118.6 112 53.6
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.4e-24 118.6 112 52.7
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 4.9e-22 110.2 202 36.1
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 1.4e-21 108.6 268 32.8
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 4.1e-21 107.1 358 28.5
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.6e-20 105.1 166 41.0
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 8.6e-19 99.4 75 60.0
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 1.4e-16 92.0 110 50.0
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 1.5e-15 88.6 71 52.1
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 1.3e-14 85.5 106 41.5
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 2.9e-14 84.3 142 38.7
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.5e-10 72.0 74 44.6
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 5.6e-10 70.1 58 51.7
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 2.1e-09 68.2 86 39.5
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 5.2e-08 63.5 366 23.0
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 5.2e-08 63.5 378 25.1
Cc08_g14820 Coffea canephora HOM05D005554 ORTHO05D007823 8.9e-08 62.8 363 23.4
SMO147G0132 Selaginella moellendorffii HOM05D005554 ORTHO05D007823 1.5e-07 62.0 360 23.9
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 2.0e-07 61.6 372 25.8
PGR031G2745 Punica granatum HOM05D005554 ORTHO05D007823 2.6e-07 61.2 362 24.0
CiPaw.12G092300 Carya illinoinensis HOM05D005554 ORTHO05D007823 4.4e-07 60.5 362 23.5
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 4.4e-07 60.5 140 34.3
SalBow1G4020 Salvia bowleyana HOM05D005554 ORTHO05D007823 1.3e-06 58.9 369 24.1
Sabra01G0078000 Salix brachista HOM05D005554 ORTHO05D007823 1.7e-06 58.5 379 24.0
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla HOM05D005554 ORTHO05D007823 2.9e-06 57.8 374 22.7
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.9e-06 57.8 257 26.5
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 2.9e-06 57.8 362 23.2
Cpa.g.sc74.56 Carica papaya HOM05D005554 ORTHO05D007823 3.8e-06 57.4 364 23.4
Potri.001G103300 Populus trichocarpa HOM05D005554 ORTHO05D007823 3.8e-06 57.4 376 22.9
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 6.4e-06 56.6 321 24.6
Actinidia14567 Actinidia chinensis HOM05D005554 ORTHO05D007823 8.4e-06 56.2 362 22.4
TAR375G0921 Trochodendron aralioides HOM05D005554 ORTHO05D007823 8.4e-06 56.2 361 22.7


User provided reference genes

Program Settings