Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25130 Nelumbo nucifera HOM05D000588 ORTHO05D277313 3.0e-52 208.4 115 100.0
Nn2g13349 Nelumbo nucifera HOM05D000588 ORTHO05D000637 9.0e-25 117.1 84 73.8
TAR626G1851 Trochodendron aralioides HOM05D000588 ORTHO05D000637 1.4e-12 76.6 113 52.2
Nn5g28475 Nelumbo nucifera HOM05D000588 ORTHO05D000637 9.7e-11 70.5 61 67.2
Nn1g03173 Nelumbo nucifera HOM05D000588 ORTHO05D000637 1.7e-10 69.7 92 57.6
TAR624G0977 Trochodendron aralioides HOM05D000588 ORTHO05D000637 4.8e-10 68.2 95 51.6
TAR629G2455 Trochodendron aralioides HOM05D000588 ORTHO05D000637 1.1e-09 67.0 95 56.8
Actinidia05006 Actinidia chinensis HOM05D000588 ORTHO05D000637 1.4e-09 66.6 105 52.4
Lj1P889T54 Lonicera japonica HOM05D000588 ORTHO05D000637 3.1e-09 65.5 105 44.8
Nn1g07507 Nelumbo nucifera HOM05D000588 ORTHO05D000637 1.5e-08 63.2 78 69.2
Potri.011G093500 Populus trichocarpa HOM05D000588 ORTHO05D000637 2.6e-08 62.4 92 50.0
Dinv10332 Davidia involucrata HOM05D000588 ORTHO05D000637 3.4e-08 62.0 104 44.2
PSO675G2013 Papaver somniferum HOM05D000588 ORTHO05D000637 4.5e-08 61.6 105 50.5
Aqoxy4G02285 Aquilegia oxysepala HOM05D000588 ORTHO05D000637 5.9e-08 61.2 113 44.2
GSVIVG01014684001 Vitis vinifera HOM05D000588 ORTHO05D000637 1.0e-07 60.5 105 47.6
Rhsim06G0229600 Rhododendron simsii HOM05D000588 ORTHO05D000637 1.3e-07 60.1 106 45.3
CSS0025175 Camellia sinensis var. sinensis HOM05D000588 ORTHO05D000637 2.2e-07 59.3 97 50.5
Cc05_g14940 Coffea canephora HOM05D000588 ORTHO05D000637 3.8e-07 58.5 107 46.7
Peaxi162Scf00006g00031 Petunia axillaris HOM05D000588 ORTHO05D000637 3.8e-07 58.5 111 45.9
Nitab4.5_0005524g0020 Nicotiana tabacum HOM05D000588 ORTHO05D000637 6.5e-07 57.8 113 44.2
Eucgr.F02049 Eucalyptus grandis HOM05D000588 ORTHO05D000637 8.5e-07 57.4 87 52.9
Nitab4.5_0000163g0200 Nicotiana tabacum HOM05D000588 ORTHO05D000637 8.5e-07 57.4 113 43.4
Nitab4.5_0021283g0010 Nicotiana tabacum HOM05D000588 ORTHO05D000637 1.1e-06 57.0 66 63.6
Sc03g0011280 Simmondsia chinensis HOM05D000588 ORTHO05D000637 1.1e-06 57.0 68 57.4
EL10Ac4g07566 Beta vulgaris HOM05D000588 ORTHO05D000637 1.9e-06 56.2 66 59.1
Thecc.01G196500 Theobroma cacao HOM05D000588 ORTHO05D000637 2.5e-06 55.8 110 39.1
Manes.13G061700 Manihot esculenta HOM05D000588 ORTHO05D000637 3.2e-06 55.5 115 37.4
Lj1A797T64 Lonicera japonica HOM05D000588 ORTHO05D000637 5.5e-06 54.7 114 40.4
Nitab4.5_0000461g0290 Nicotiana tabacum HOM05D000588 ORTHO05D000637 5.5e-06 54.7 66 62.1
Sabra11G0088100 Salix brachista HOM05D000588 ORTHO05D000637 7.2e-06 54.3 60 53.3
Migut.H01755 Erythranthe guttata HOM05D000588 ORTHO05D000637 9.4e-06 53.9 110 44.5


User provided reference genes

Program Settings