Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24938 Nelumbo nucifera HOM05D000275 ORTHO05D000181 7.0e-83 310.5 144 100.0
TAR636G0501 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.8e-14 83.2 142 34.5
TAR374G1222 Trochodendron aralioides HOM05D000275 ORTHO05D000181 5.8e-13 78.2 93 39.8
Gohir.D08G044700 Gossypium hirsutum HOM05D000275 ORTHO05D000181 8.4e-12 74.3 104 33.7
Gorai.004G043700 Gossypium raimondii HOM05D000275 ORTHO05D000181 1.9e-11 73.2 104 33.7
Actinidia22157 Actinidia chinensis HOM05D000275 ORTHO05D000181 5.4e-11 71.6 101 35.6
CiPaw.02G040200 Carya illinoinensis HOM05D000275 ORTHO05D000181 5.4e-11 71.6 145 31.0
Duzib268G0438 Durio zibethinus HOM05D000275 ORTHO05D000181 5.4e-11 71.6 97 34.0
Atru.chr5.658 Acer truncatum HOM05D000275 ORTHO05D000181 9.3e-11 70.9 92 33.7
Cpa.g.sc96.4 Carica papaya HOM05D002290 ORTHO05D002532 3.5e-10 68.9 95 33.7
Gohir.A08G034200 Gossypium hirsutum HOM05D000275 ORTHO05D000181 6.0e-10 68.2 104 31.7
Prupe.5G119400 Prunus persica HOM05D000354 ORTHO05D000181 3.9e-09 65.5 96 35.4
Actinidia10131 Actinidia chinensis HOM05D000275 ORTHO05D000181 8.7e-09 64.3 100 34.0
Prupe.5G119200 Prunus persica HOM05D000354 ORTHO05D000181 8.7e-09 64.3 96 34.4
ATR1098G105 Amborella trichopoda HOM05D000275 ORTHO05D000181 1.5e-08 63.5 92 32.6
Hma1.2p1_0295F.1_g116650 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 1.5e-08 63.5 94 36.2
ATR1098G069 Amborella trichopoda HOM05D000275 ORTHO05D000181 3.3e-08 62.4 92 33.7
Actinidia08273 Actinidia chinensis HOM05D000275 ORTHO05D000181 4.3e-08 62.0 99 32.3
ClCG05G000860 Citrullus lanatus HOM05D000275 ORTHO05D000181 4.3e-08 62.0 95 30.5
Sed0025062 Sechium edule HOM05D000275 ORTHO05D000181 7.4e-08 61.2 96 29.2
Sc01g0002760 Simmondsia chinensis HOM05D000275 ORTHO05D000181 9.6e-08 60.8 100 33.0
Gohir.A08G034300 Gossypium hirsutum HOM05D000275 ORTHO05D000181 1.3e-07 60.5 94 31.9
arahy.Tifrunner.gnm1.ann1.RH0ZME Arachis hypogaea HOM05D000275 ORTHO05D000181 2.1e-07 59.7 93 29.0
arahy.Tifrunner.gnm1.ann1.L8Z3CA Arachis hypogaea HOM05D000275 ORTHO05D000181 2.8e-07 59.3 93 29.0
Lalb_Chr21g0316631 Lupinus albus HOM05D000275 ORTHO05D000181 2.8e-07 59.3 94 33.0
CSS0044840 Camellia sinensis var. sinensis HOM05D007676 ORTHO05D009456 1.1e-06 57.4 95 30.5
Gorai.004G043800 Gossypium raimondii HOM05D000275 ORTHO05D000181 1.8e-06 56.6 94 31.9
Gohir.D08G044800 Gossypium hirsutum HOM05D000275 ORTHO05D000181 4.0e-06 55.5 94 31.9
Aa31LG5G22780 Aethionema arabicum HOM05D000275 ORTHO05D003378 5.3e-06 55.1 94 30.9
Aa31LG5G22790 Aethionema arabicum HOM05D000275 ORTHO05D003378 6.9e-06 54.7 95 29.5
FAN12G2565 Fragaria x ananassa HOM05D007676 ORTHO05D009456 6.9e-06 54.7 92 33.7
Lsat_1_v5_gn_4_33160 Lactuca sativa HOM05D009669 ORTHO05D000181 9.0e-06 54.3 92 30.4


User provided reference genes

Program Settings