Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24905 Nelumbo nucifera HOM05D004461 ORTHO05D046729 4.7e-29 130.6 68 100.0
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 5.0e-15 84.0 46 91.3
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 8.0e-13 76.6 55 72.7
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 1.8e-12 75.5 45 75.6
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 4.0e-12 74.3 44 77.3
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 4.0e-12 74.3 45 77.8
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 4.0e-12 74.3 45 77.8
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 6.8e-12 73.6 45 75.6
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 8.8e-12 73.2 58 70.7
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 1.2e-11 72.8 45 71.1
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 2.0e-11 72.0 45 77.8
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 5.7e-11 70.5 44 77.3
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 5.7e-11 70.5 43 79.1
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 5.7e-11 70.5 45 75.6
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 5.7e-11 70.5 45 75.6
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 9.8e-11 69.7 45 75.6
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 1.3e-10 69.3 45 73.3
CDE09G0162 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 1.3e-10 69.3 43 69.8
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.3e-10 69.3 45 73.3
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.3e-10 69.3 45 73.3
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 1.3e-10 69.3 44 75.0
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 1.3e-10 69.3 45 75.6
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.7e-10 68.9 45 73.3
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 2.2e-10 68.6 43 74.4
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 2.2e-10 68.6 44 72.7
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 2.2e-10 68.6 42 78.6
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 2.2e-10 68.6 42 78.6
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 2.8e-10 68.2 43 79.1
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 2.8e-10 68.2 43 76.7
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 2.8e-10 68.2 52 73.1
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 3.7e-10 67.8 43 74.4
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 3.7e-10 67.8 44 72.7
FAN23G0644 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.7e-10 67.8 44 72.7
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.7e-10 67.8 44 72.7
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.7e-10 67.8 44 72.7
SHI26119 Sapria himalayana HOM05D004461 ORTHO05D005543 3.7e-10 67.8 46 65.2
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 4.8e-10 67.4 54 66.7
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 4.8e-10 67.4 54 66.7
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 4.8e-10 67.4 44 75.0
Oeu020818.1 Olea europaea HOM05D004461 ORTHO05D005543 4.8e-10 67.4 43 79.1
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 4.8e-10 67.4 47 72.3
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 6.3e-10 67.0 43 72.1
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 6.3e-10 67.0 46 69.6
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 8.3e-10 66.6 44 72.7
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 8.3e-10 66.6 44 70.5
THA.LOC104802333 Tarenaya hassleriana HOM05D004461 ORTHO05D005543 1.1e-09 66.2 45 75.6
Ciclev10018900m.g Citrus clementina HOM05D004461 ORTHO05D005543 1.4e-09 65.9 45 71.1
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 1.8e-09 65.5 45 71.1
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 2.4e-09 65.1 45 66.7
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 2.4e-09 65.1 43 69.8
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 2.4e-09 65.1 43 69.8
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 2.4e-09 65.1 43 69.8
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 2.4e-09 65.1 45 71.1
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 2.4e-09 65.1 43 74.4
Ah.13g073400 Amaranthus hybridus HOM05D004461 ORTHO05D005543 3.1e-09 64.7 46 69.6
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 3.1e-09 64.7 42 76.2
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 3.1e-09 64.7 43 69.8
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 3.1e-09 64.7 43 69.8
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 3.1e-09 64.7 40 77.5
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 4.1e-09 64.3 43 69.8
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 4.1e-09 64.3 42 76.2
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 5.4e-09 63.9 45 64.4
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 5.4e-09 63.9 42 78.6
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 5.4e-09 63.9 42 71.4
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 5.4e-09 63.9 43 69.8
Sed0010516 Sechium edule HOM05D004461 ORTHO05D005543 5.4e-09 63.9 43 67.4
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 7.0e-09 63.5 45 64.4
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 7.0e-09 63.5 45 68.9
Sed0020878 Sechium edule HOM05D004461 ORTHO05D005543 7.0e-09 63.5 43 67.4
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 7.0e-09 63.5 43 72.1
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 7.0e-09 63.5 43 72.1
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 7.0e-09 63.5 43 72.1
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 9.1e-09 63.2 45 71.1
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 1.2e-08 62.8 41 73.2
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 1.2e-08 62.8 41 73.2
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 1.2e-08 62.8 43 72.1
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 2.0e-08 62.0 42 69.0
BcaC07g40446 Brassica carinata HOM05D004461 ORTHO05D005543 2.7e-08 61.6 41 73.2
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 2.7e-08 61.6 41 73.2
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 2.7e-08 61.6 42 71.4
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 2.7e-08 61.6 43 65.1
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 3.5e-08 61.2 41 70.7
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 3.5e-08 61.2 41 70.7
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 3.5e-08 61.2 42 69.0
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 4.5e-08 60.8 49 65.3
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 4.5e-08 60.8 44 65.9
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 5.9e-08 60.5 40 75.0
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 5.9e-08 60.5 40 75.0
Ciclev10023886m.g Citrus clementina HOM05D004461 ORTHO05D005543 1.0e-07 59.7 41 73.2
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 1.0e-07 59.7 41 70.7
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.3e-07 59.3 46 67.4
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.3e-07 59.3 38 73.7
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 1.3e-07 59.3 42 69.0
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 1.7e-07 58.9 43 62.8
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 2.3e-07 58.5 69 47.8
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 2.3e-07 58.5 69 47.8
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 2.3e-07 58.5 40 70.0
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 2.9e-07 58.2 46 65.2
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 2.9e-07 58.2 46 65.2
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 5.0e-07 57.4 41 68.3
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 8.6e-07 56.6 39 74.4
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 1.9e-06 55.5 41 68.3
Glyma.04G248400 Glycine max HOM05D004461 ORTHO05D046729 2.5e-06 55.1 38 71.1
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 3.3e-06 54.7 41 61.0
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 7.2e-06 53.5 41 65.9


User provided reference genes

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