Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 3.4e-107 391.7 203 100.0
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.8e-61 239.2 193 66.3
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.1e-60 237.3 181 67.4
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.5e-54 216.9 195 57.9
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 4.3e-54 215.3 187 62.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 9.6e-54 214.2 184 62.0
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.1e-53 213.0 196 56.6
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 4.8e-53 211.8 197 59.4
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.4e-52 209.5 184 61.4
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 6.9e-52 208.0 187 60.4
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.5e-51 206.8 179 62.0
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 2.2e-50 203.0 179 60.3
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 4.9e-50 201.8 177 61.0
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 6.4e-50 201.4 184 60.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.1e-49 200.7 154 66.9
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.1e-49 200.7 175 61.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.9e-49 199.9 179 59.8
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 5.4e-49 198.4 177 60.5
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 5.4e-49 198.4 155 63.9
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 7.1e-49 198.0 175 59.4
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.0e-47 194.1 158 62.7
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 1.7e-47 193.4 144 66.0
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.7e-47 193.4 155 63.9
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 3.0e-47 192.6 176 58.0
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 3.9e-47 192.2 179 58.1
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.1e-46 190.7 183 59.0
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.9e-46 189.9 158 62.0
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 1.9e-46 189.9 175 57.7
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.9e-46 189.9 186 56.5
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 2.5e-46 189.5 183 54.1
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 3.3e-46 189.1 174 57.5
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 7.3e-46 188.0 181 56.9
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 9.6e-46 187.6 200 52.5
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.3e-45 187.2 175 57.1
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.6e-45 186.8 180 59.4
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 2.1e-45 186.4 180 55.0
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.8e-45 186.0 168 60.7
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.8e-45 186.0 156 62.2
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 3.6e-45 185.7 151 64.9
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 3.6e-45 185.7 179 56.4
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 3.6e-45 185.7 156 62.8
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 4.8e-45 185.3 206 52.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.1e-44 184.1 188 53.2
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.1e-44 184.1 181 56.4
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.4e-44 183.0 176 54.0
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.4e-44 183.0 176 54.0
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.4e-44 183.0 179 52.0
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.1e-44 182.6 176 54.0
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 4.0e-44 182.2 175 54.9
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 9.0e-44 181.0 159 61.6
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 9.0e-44 181.0 172 59.3
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 2.0e-43 179.9 181 52.5
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 2.0e-43 179.9 153 63.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 7.6e-43 177.9 203 50.7
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.7e-42 176.8 172 58.7
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.1e-41 174.1 195 52.8
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-41 173.7 166 59.0
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.2e-41 172.2 177 54.8
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 9.3e-41 171.0 183 49.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.6e-40 170.2 165 58.2
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 2.7e-40 169.5 178 55.6
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 6.0e-40 168.3 171 58.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 7.9e-40 167.9 182 46.7
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.0e-39 167.5 178 55.6
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 3.0e-39 166.0 174 52.3
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.1e-39 165.2 162 58.0
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 5.1e-39 165.2 137 63.5
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.5e-38 163.7 155 53.5
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.5e-38 162.9 182 50.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.5e-38 162.9 147 55.8
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 3.3e-38 162.5 162 51.2
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.8e-37 159.5 184 49.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.8e-37 159.5 182 46.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 3.7e-37 159.1 164 54.9
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.1e-36 157.5 154 54.5
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 2.4e-36 156.4 127 63.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.4e-36 156.4 146 58.9
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 2.0e-35 153.3 174 45.4
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 3.4e-35 152.5 184 50.0
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 5.8e-35 151.8 116 67.2
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 7.6e-35 151.4 170 47.6
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.0e-34 151.0 185 50.8
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.3e-34 150.6 160 45.6
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.7e-34 150.2 170 48.8
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.9e-34 149.4 160 45.6
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.9e-34 149.4 160 45.6
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 4.9e-34 148.7 178 49.4
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.9e-34 148.7 149 51.7
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.1e-33 147.5 172 45.3
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.4e-33 147.1 160 45.0
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.9e-33 146.7 176 49.4
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 3.2e-33 146.0 172 47.7
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 3.2e-33 146.0 135 61.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 3.2e-33 146.0 147 53.7
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 5.5e-33 145.2 160 44.4
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 5.5e-33 145.2 160 44.4
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.3e-33 144.4 154 46.8
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.3e-33 144.4 154 46.8
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.6e-32 143.7 170 42.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 8.7e-31 137.9 173 44.5
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.3e-29 134.0 164 47.6
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 6.3e-29 131.7 128 56.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 5.3e-28 128.6 119 58.0
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.7e-24 116.3 117 53.8
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.9e-22 110.2 94 56.4
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.9e-22 110.2 116 43.1
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.8e-21 105.5 94 53.2
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 6.3e-21 105.1 114 50.9
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.4e-17 94.0 121 46.3
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 6.3e-13 78.6 128 37.5
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 3.8e-10 69.3 155 32.9
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 9.4e-09 64.7 89 43.8
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.1e-06 57.8 39 66.7


User provided reference genes

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