Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 0.0e+00 1347.4 775 100.0
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 3.8e-220 768.8 796 63.4
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 6.0e-189 665.2 792 57.6
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 8.4e-175 618.2 801 56.4
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.0e-172 611.3 712 58.7
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 6.7e-172 608.6 797 54.6
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 4.0e-169 599.4 775 53.3
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.6e-168 596.7 792 53.5
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 4.5e-168 595.9 724 55.2
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 3.5e-165 586.3 761 53.1
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 6.0e-165 585.5 760 53.2
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 8.7e-164 581.6 677 58.6
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.1e-163 581.3 888 49.0
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 8.2e-162 575.1 789 51.6
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.8e-161 573.9 784 51.9
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 3.1e-161 573.2 784 51.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 9.0e-161 571.6 831 42.5
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 9.0e-161 571.6 787 51.5
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.4e-160 569.7 756 52.5
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 8.4e-159 565.1 754 52.4
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.9e-157 558.5 747 52.5
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 8.7e-156 555.1 803 49.4
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.0e-152 543.9 717 52.6
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 8.5e-151 538.5 710 53.7
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 5.5e-150 535.8 791 50.8
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 9.7e-147 525.0 759 49.9
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.3e-146 524.6 789 49.3
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 2.6e-144 516.9 706 52.5
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.0e-143 515.0 620 48.1
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.7e-143 514.2 723 51.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.9e-143 513.5 802 48.5
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.9e-143 513.5 834 47.7
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 8.5e-143 511.9 747 50.2
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 8.5e-143 511.9 708 51.8
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 2.1e-141 507.3 762 49.7
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.8e-140 504.2 770 48.7
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-139 501.5 743 47.2
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 4.4e-139 499.6 762 49.2
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 4.4e-139 499.6 789 47.1
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.3e-138 498.0 733 48.7
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.7e-138 497.7 808 48.1
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.1e-137 495.0 767 48.8
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.1e-137 495.0 789 46.8
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 3.8e-135 486.5 655 51.3
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.5e-134 484.6 625 54.9
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 4.2e-134 483.0 711 50.5
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 4.7e-133 479.6 715 49.9
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.4e-132 478.0 636 55.3
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.1e-131 474.9 741 47.5
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 2.0e-131 474.2 714 49.9
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 9.1e-129 465.3 660 49.8
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.2e-128 464.9 710 50.7
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 3.5e-128 463.4 636 53.6
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 2.5e-126 457.2 698 49.0
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 9.4e-126 455.3 761 48.0
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 6.1e-125 452.6 697 49.5
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.8e-124 451.1 693 50.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 4.0e-124 449.9 716 48.0
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.2e-123 448.4 701 49.6
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.7e-122 443.4 717 48.3
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 7.0e-121 439.1 660 51.8
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.6e-120 438.0 646 43.7
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 5.9e-120 436.0 703 48.4
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 3.8e-119 433.3 780 44.2
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 8.5e-119 432.2 669 50.1
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.1e-117 427.6 701 48.8
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.7e-114 417.9 711 47.3
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.7e-114 417.9 780 45.0
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 8.3e-114 415.6 548 56.4
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.7e-112 410.6 738 45.3
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 7.7e-112 409.1 704 47.6
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.5e-110 404.8 696 47.0
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.9e-110 404.4 696 47.6
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 8.0e-109 399.1 713 47.7
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 4.0e-108 396.7 752 45.3
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 9.8e-107 392.1 640 46.9
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 3.7e-106 390.2 601 42.9
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 4.9e-106 389.8 777 44.4
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 4.1e-105 386.7 639 48.8
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 5.4e-105 386.3 473 45.5
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 7.5e-99 365.9 628 46.5
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.1e-92 345.5 572 50.7
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.8e-92 344.7 702 42.9
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.3e-90 338.6 470 43.8
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.3e-87 328.6 533 48.8
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.2e-85 322.0 577 46.8
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 2.6e-83 314.3 576 48.1
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.2e-77 295.4 761 34.3
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.4e-76 291.2 707 39.7
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.9e-71 273.9 235 57.0
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.1e-60 239.2 462 50.6
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.5e-54 218.0 346 41.3
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 9.6e-54 216.1 441 47.4
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 2.8e-53 214.5 244 50.0
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 2.7e-48 198.0 411 49.6
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 6.3e-45 186.8 706 28.8
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.4e-43 181.0 173 53.2
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.8e-39 168.7 503 28.2
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.7e-34 152.1 462 28.8
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 8.2e-29 133.3 200 41.5
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 3.2e-25 121.3 222 39.2
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 3.6e-24 117.9 253 34.4
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-21 109.4 218 40.4
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.8e-20 105.5 77 70.1
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.4e-20 105.1 198 37.4
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.9e-18 98.2 311 29.3
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.5e-17 95.9 246 32.5
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 7.5e-14 83.6 47 74.5
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 7.5e-14 83.6 86 50.0
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 2.4e-12 78.6 81 50.6
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 4.1e-12 77.8 75 50.7
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 3.5e-11 74.7 70 54.3
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 2.7e-08 65.1 129 34.1
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 3.0e-07 61.6 123 40.7


User provided reference genes

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