Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 6.1e-233 810.4 410 100.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.1e-176 623.6 410 74.1
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.3e-171 606.7 414 72.7
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 7.6e-167 590.9 373 75.9
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 9.9e-167 590.5 392 73.5
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.7e-166 589.7 405 70.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 2.3e-163 579.3 392 70.4
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 3.9e-163 578.6 406 69.2
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 6.2e-161 571.2 401 69.1
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 9.0e-160 567.4 377 73.2
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.3e-158 563.5 418 66.3
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 1.7e-158 563.1 399 65.2
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-158 563.1 383 68.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.7e-158 563.1 397 67.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 2.9e-158 562.4 411 65.7
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 8.4e-158 560.8 395 66.8
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.1e-157 560.5 383 68.1
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.4e-157 560.1 378 71.2
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.6e-156 556.6 397 66.2
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.5e-156 555.4 396 66.4
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.5e-156 555.4 377 69.8
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 6.0e-156 554.7 415 67.7
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.3e-155 553.5 384 68.5
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 2.3e-155 552.7 407 66.6
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 6.7e-155 551.2 384 68.2
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.1e-154 550.4 423 64.8
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.5e-154 550.1 396 66.7
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 3.3e-154 548.9 400 66.2
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.8e-153 545.8 428 64.3
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.8e-153 545.8 382 67.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 4.8e-153 545.0 384 69.3
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 6.2e-153 544.7 371 71.2
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.4e-152 543.5 399 65.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.1e-152 542.3 382 67.3
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 4.0e-152 542.0 416 65.9
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 3.4e-151 538.9 411 66.9
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 5.8e-151 538.1 395 65.1
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.3e-150 537.0 396 64.9
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 3.8e-150 535.4 392 65.6
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.1e-149 533.9 392 65.8
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 3.2e-149 532.3 384 64.8
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.2e-148 530.4 430 61.4
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 4.6e-148 528.5 395 64.8
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.0e-147 527.3 372 66.9
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 5.1e-147 525.0 370 67.6
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 6.7e-147 524.6 383 64.2
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 6.7e-147 524.6 392 64.0
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.3e-145 520.4 383 64.5
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.2e-145 519.6 385 65.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.8e-145 519.2 383 65.8
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 6.3e-145 518.1 383 65.8
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 6.3e-145 518.1 394 64.2
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 1.1e-144 517.3 382 63.6
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.8e-144 516.5 391 63.7
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 2.4e-144 516.2 384 63.5
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 3.1e-144 515.8 385 64.7
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 4.1e-144 515.4 383 64.8
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 9.0e-144 514.2 385 63.9
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 4.2e-141 505.4 370 65.1
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 5.5e-141 505.0 392 61.7
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.5e-138 496.1 381 63.5
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 9.7e-138 494.2 425 60.7
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.7e-137 493.4 381 61.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.8e-136 490.0 438 58.2
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 5.3e-136 488.4 392 59.9
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.2e-135 487.3 382 62.8
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.5e-135 486.9 382 62.8
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.5e-135 486.9 382 62.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.6e-135 486.1 409 59.9
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 3.4e-135 485.7 386 60.6
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.0e-134 484.2 382 62.6
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 5.0e-134 481.9 333 68.5
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 9.4e-133 477.6 450 55.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 3.9e-131 472.2 419 57.0
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 6.7e-131 471.5 402 60.4
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.7e-130 468.4 413 58.6
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 2.9e-126 456.1 376 62.8
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.0e-126 455.3 408 56.6
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 3.2e-125 452.6 384 58.6
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.0e-122 443.4 296 68.9
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-119 434.1 296 68.6
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 3.5e-119 432.6 284 68.0
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 2.5e-117 426.4 381 55.1
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 9.4e-117 424.5 297 66.3
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 3.1e-112 409.5 287 65.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 5.9e-111 405.2 296 65.2
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.6e-103 380.6 294 58.5
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 3.6e-92 342.8 295 62.7
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.3e-91 340.1 231 69.7
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 7.8e-87 325.1 393 46.1
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 1.3e-86 324.3 270 57.4
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.4e-80 303.5 243 59.7
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.2e-80 303.1 228 63.6
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 2.1e-79 300.4 276 56.2
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 6.0e-79 298.9 217 67.7
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 3.5e-71 273.1 202 64.9
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 2.4e-64 250.4 390 36.4
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.6e-60 236.5 156 72.4
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 3.2e-56 223.4 175 63.4
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 2.8e-44 183.7 395 32.7
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 4.0e-43 179.9 146 63.0
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.8e-42 176.0 141 60.3
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.4e-40 171.4 135 56.3
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.3e-28 131.7 119 61.3
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 1.5e-26 124.8 95 64.2
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.7e-25 121.3 88 63.6
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 2.5e-24 117.5 358 28.5
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.7e-20 104.8 88 58.0
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.8e-20 104.0 350 26.0
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.7e-20 103.6 376 25.8
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 9.4e-16 89.0 73 58.9
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 4.7e-15 86.7 80 48.8
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.0e-13 81.3 313 28.8
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 9.7e-13 79.0 115 33.9
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.3e-12 78.6 62 66.1
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 4.1e-11 73.6 68 52.9
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 3.8e-09 67.0 63 52.4
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.5e-08 65.1 111 34.2


User provided reference genes

Program Settings