Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24635 Nelumbo nucifera HOM05D000633 ORTHO05D000477 2.4e-29 131.3 59 100.0
Nn1g04626 Nelumbo nucifera HOM05D000633 ORTHO05D000477 7.7e-12 73.2 37 86.5
Hma1.2p1_0686F.1_g203325 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 6.7e-08 60.1 49 53.1
Hma1.2p1_2485F.1_g323090 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 6.7e-08 60.1 49 53.1
Peaxi162Scf00207g01421 Petunia axillaris HOM05D000633 ORTHO05D000477 1.1e-07 59.3 33 69.7
Actinidia24720 Actinidia chinensis HOM05D000633 ORTHO05D004685 2.0e-07 58.5 30 80.0
Dinv20418 Davidia involucrata HOM05D000633 ORTHO05D000477 2.0e-07 58.5 30 80.0
Rhsim08G0240300 Rhododendron simsii HOM05D000633 ORTHO05D000477 2.0e-07 58.5 30 80.0
Actinidia26019 Actinidia chinensis HOM05D000633 ORTHO05D000477 2.6e-07 58.2 30 76.7
CSS0005178 Camellia sinensis var. sinensis HOM05D000633 ORTHO05D000477 2.6e-07 58.2 30 80.0
Cpa.g.c43223 Carica papaya HOM05D000633 ORTHO05D000477 2.6e-07 58.2 30 76.7
Nn8g38613 Nelumbo nucifera HOM05D000633 ORTHO05D000477 2.6e-07 58.2 30 80.0
Prupe.3G038900 Prunus persica HOM05D000633 ORTHO05D000477 3.3e-07 57.8 30 80.0
Thecc.06G122700 Theobroma cacao HOM05D000633 ORTHO05D000477 3.3e-07 57.8 30 76.7
QL11p001062 Quercus lobata HOM05D000633 ORTHO05D000477 4.4e-07 57.4 34 64.7
Atru.chr1.4040 Acer truncatum HOM05D000633 ORTHO05D000477 5.7e-07 57.0 30 73.3
Actinidia21795 Actinidia chinensis HOM05D000633 ORTHO05D000477 5.7e-07 57.0 30 76.7
Gohir.A10G055500 Gossypium hirsutum HOM05D000633 ORTHO05D000477 5.7e-07 57.0 30 73.3
Gohir.D10G057400 Gossypium hirsutum HOM05D000633 ORTHO05D000477 5.7e-07 57.0 30 73.3
Gorai.011G061500 Gossypium raimondii HOM05D000633 ORTHO05D000477 5.7e-07 57.0 30 73.3
Lj5C34T4 Lonicera japonica HOM05D000633 ORTHO05D000477 5.7e-07 57.0 49 49.0
Cfa002975 Carpinus fangiana HOM05D000633 ORTHO05D000477 7.4e-07 56.6 40 60.0
Ciclev10026666m.g Citrus clementina HOM05D000633 ORTHO05D000477 7.4e-07 56.6 30 73.3
Haze_26027 Corylus avellana HOM05D000633 ORTHO05D000477 7.4e-07 56.6 40 60.0
FAN26G0621 Fragaria x ananassa HOM05D000633 ORTHO05D000477 7.4e-07 56.6 30 76.7
Lsat_1_v5_gn_5_134981 Lactuca sativa HOM05D000633 ORTHO05D000477 7.4e-07 56.6 30 80.0
MD02G1094400 Malus domestica HOM05D000633 ORTHO05D000477 7.4e-07 56.6 30 73.3
Potri.001G166900 Populus trichocarpa HOM05D000633 ORTHO05D000477 7.4e-07 56.6 30 76.7
GSVIVG01035488001 Vitis vinifera HOM05D000633 ORTHO05D000477 7.4e-07 56.6 30 76.7
Dinv37856 Davidia involucrata HOM05D000633 ORTHO05D000477 9.7e-07 56.2 30 76.7
Duzib235G0787 Durio zibethinus HOM05D000633 ORTHO05D000477 9.7e-07 56.2 30 73.3
Eucgr.F04401 Eucalyptus grandis HOM05D000633 ORTHO05D000477 9.7e-07 56.2 30 73.3
Medtr8g021190 Medicago truncatula HOM05D000633 ORTHO05D000477 9.7e-07 56.2 30 73.3
Nitab4.5_0002716g0020 Nicotiana tabacum HOM05D000633 ORTHO05D000477 9.7e-07 56.2 30 73.3
Sabra01G0126400 Salix brachista HOM05D000633 ORTHO05D000477 9.7e-07 56.2 30 73.3
CANSAT56G1778 Cannabis sativa HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 70.0
Hma1.2p1_0229F.1_g096650 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 73.3
Hma1.2p1_0291F.1_g114910 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 73.3
Lsat_1_v5_gn_4_94381 Lactuca sativa HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 76.7
MD15G1219300 Malus domestica HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 70.0
Nitab4.5_0005225g0010 Nicotiana tabacum HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 70.0
Prupe.7G196600 Prunus persica HOM05D000633 ORTHO05D000477 1.3e-06 55.8 30 70.0
CiPaw.01G217100 Carya illinoinensis HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
FvH4_1g08900 Fragaria vesca HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
FAN03G2794 Fragaria x ananassa HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
FAN19G1744 Fragaria x ananassa HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
FAN23G2880 Fragaria x ananassa HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
FAN26G2298 Fragaria x ananassa HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
FAN28G1851 Fragaria x ananassa HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
Lj3g0021496 Lotus japonicus HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 70.0
Phvul.010G128400 Phaseolus vulgaris HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 70.0
RcHm_v2.0_Chr2g0095361 Rosa chinensis HOM05D000633 ORTHO05D000477 1.7e-06 55.5 30 73.3
CAN.G862.49 Capsicum annuum HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Cfa003521 Carpinus fangiana HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 73.3
Haze_16047 Corylus avellana HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 73.3
Lalb_Chr13g0299391 Lupinus albus HOM05D000633 ORTHO05D000477 2.2e-06 55.1 32 65.6
Lalb_Chr17g0343541 Lupinus albus HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 66.7
Manes.03G041300 Manihot esculenta HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Medtr4g125010 Medicago truncatula HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Psat7g057680 Pisum sativum HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Potri.006G140600 Populus trichocarpa HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Solyc03g122300.3 Solanum lycopersicum HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Solyc06g062960.3 Solanum lycopersicum HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 66.7
Sopen03g041030 Solanum pennellii HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Sopen06g022410 Solanum pennellii HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 66.7
PGSC0003DMG400022897 Solanum tuberosum HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
TPR.G16735 Trifolium pratense HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
TPR.G27626 Trifolium pratense HOM05D000633 ORTHO05D000477 2.2e-06 55.1 30 70.0
Aqoxy7G01025 Aquilegia oxysepala HOM05D000633 ORTHO05D000477 2.8e-06 54.7 30 73.3
CAN.G825.3 Capsicum annuum HOM05D000633 ORTHO05D000477 2.8e-06 54.7 30 70.0
Manes.16G094402 Manihot esculenta HOM05D000633 ORTHO05D000477 2.8e-06 54.7 30 66.7
Cc00_g30810 Coffea canephora HOM05D000633 ORTHO05D000477 3.7e-06 54.3 30 70.0
Dinv25548 Davidia involucrata HOM05D001055 ORTHO05D000867 3.7e-06 54.3 30 70.0
Glyma.16G009000 Glycine max HOM05D000633 ORTHO05D000477 3.7e-06 54.3 30 70.0
Nitab4.5_0002898g0080 Nicotiana tabacum HOM05D000633 ORTHO05D000477 3.7e-06 54.3 30 66.7
TAR626G0664 Trochodendron aralioides HOM05D000633 ORTHO05D000477 3.7e-06 54.3 30 76.7
Atru.chr7.1721 Acer truncatum HOM05D000633 ORTHO05D000477 4.8e-06 53.9 33 60.6
CiPaw.04G142400 Carya illinoinensis HOM05D000633 ORTHO05D000477 4.8e-06 53.9 30 70.0
COL.COLO4_18082 Corchorus olitorius HOM05D000633 ORTHO05D000477 4.8e-06 53.9 30 70.0
Gohir.D05G035700 Gossypium hirsutum HOM05D000633 ORTHO05D000477 4.8e-06 53.9 30 70.0
TAR667G0004 Trochodendron aralioides HOM05D000633 ORTHO05D000477 4.8e-06 53.9 30 73.3
CiPaw.03G204800 Carya illinoinensis HOM05D000633 ORTHO05D000477 6.3e-06 53.5 40 57.5
Duzib160G0745 Durio zibethinus HOM05D000633 ORTHO05D000477 6.3e-06 53.5 30 73.3
PGR119G1770 Punica granatum HOM05D000633 ORTHO05D000477 6.3e-06 53.5 30 70.0
QL05p003972 Quercus lobata HOM05D000633 ORTHO05D000477 6.3e-06 53.5 30 70.0
VMungo0331G1059 Vigna mungo HOM05D000633 ORTHO05D000477 6.3e-06 53.5 30 66.7
Ca_23397_v3 Cicer arietinum L. HOM05D000633 ORTHO05D000477 8.2e-06 53.1 30 66.7
Eucgr.C03308 Eucalyptus grandis HOM05D000633 ORTHO05D000477 8.2e-06 53.1 30 60.0
HanXRQChr12g0360431 Helianthus annuus HOM05D000633 ORTHO05D000477 8.2e-06 53.1 30 73.3
Potri.003G067800 Populus trichocarpa HOM05D000633 ORTHO05D000477 8.2e-06 53.1 30 73.3
Sabra03G0039700 Salix brachista HOM05D000633 ORTHO05D000477 8.2e-06 53.1 30 73.3
PGSC0003DMG400004892 Solanum tuberosum HOM05D000633 ORTHO05D000477 8.2e-06 53.1 30 66.7


User provided reference genes

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