Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.8e-105 385.2 182 100.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 7.0e-80 300.8 182 79.1
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.0e-75 285.4 182 76.4
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 7.5e-74 280.8 182 74.2
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.8e-73 278.1 183 74.3
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.8e-73 278.1 183 74.3
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.8e-73 278.1 183 74.3
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.8e-73 278.1 183 74.3
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.8e-73 278.1 183 74.3
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-71 273.5 183 73.2
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 5.9e-71 271.2 181 72.9
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 7.7e-71 270.8 181 71.8
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 2.2e-70 269.2 182 72.0
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 1.1e-69 266.9 181 71.8
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 2.5e-69 265.8 184 70.7
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.5e-69 264.6 174 74.1
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 7.2e-69 264.2 181 72.4
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 4.7e-68 261.5 183 71.6
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 3.0e-67 258.8 181 69.6
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 1.2e-66 256.9 183 70.5
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-66 255.4 184 69.6
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-66 255.4 184 69.6
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.7e-65 253.1 181 70.2
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 2.2e-65 252.7 183 69.4
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-64 250.0 163 74.8
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 7.0e-64 247.7 185 67.6
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.0e-63 246.1 163 74.2
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 4.5e-63 245.0 183 67.2
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.9e-63 244.6 172 70.9
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.9e-63 244.6 172 70.9
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.0e-62 243.8 181 68.0
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 1.7e-62 243.0 181 65.7
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.7e-62 243.0 181 65.7
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 2.3e-62 242.7 181 66.9
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 2.3e-62 242.7 181 66.9
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 2.3e-62 242.7 181 66.9
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 2.9e-62 242.3 181 67.4
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 2.9e-62 242.3 181 66.9
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 5.0e-62 241.5 181 67.4
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.9e-61 239.6 168 71.4
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.4e-56 222.6 178 65.7
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 4.1e-56 221.9 142 76.1
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 5.4e-56 221.5 182 63.2
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 7.0e-56 221.1 182 59.3
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 7.0e-56 221.1 182 59.3
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 1.3e-54 216.9 181 64.1
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.0e-54 214.9 181 61.3
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.6e-54 214.2 149 71.8
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.6e-54 214.2 149 71.8
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.6e-54 214.2 149 71.8
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.6e-54 214.2 149 71.8
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.6e-54 214.2 149 71.8
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-53 213.0 181 60.8
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-52 210.3 172 60.5
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 3.1e-51 205.7 181 56.4
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 6.8e-51 204.5 182 55.5
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.6e-50 202.6 183 59.6
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 1.7e-49 199.9 148 67.6
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-48 196.4 184 57.6
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 3.2e-48 195.7 154 66.2
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 7.8e-47 191.0 179 57.0
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 4.3e-45 185.3 178 59.0
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.6e-44 183.3 142 65.5
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 2.6e-42 176.0 180 54.4
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.5e-39 165.6 172 55.2
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 3.0e-38 162.5 117 70.1
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 3.9e-38 162.2 135 62.2
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.1e-37 160.6 183 50.3
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.0e-35 152.1 149 55.7
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 2.6e-34 149.4 114 69.3
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.6e-34 147.9 148 55.4
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-31 140.2 181 43.1
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.5e-29 132.9 101 67.3
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.4e-27 126.3 98 66.3
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 2.0e-26 123.2 115 53.0
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 2.9e-25 119.4 176 40.9
Gorai.001G230600 Gossypium raimondii HOM05D004473 ORTHO05D005652 7.8e-23 111.3 97 64.9
Nitab4.5_0001439g0120 Nicotiana tabacum HOM05D004473 ORTHO05D005652 7.3e-21 104.8 88 60.2
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 6.2e-20 101.7 62 77.4
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.1e-19 100.9 69 63.8
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.1e-19 100.9 69 63.8
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 3.4e-18 95.9 182 34.1
Gohir.A07G155811 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.8e-18 95.1 67 70.1
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 5.8e-18 95.1 79 58.2
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.1e-15 86.7 53 75.5
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.3e-14 84.0 58 70.7
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 1.9e-13 80.1 79 55.7
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 2.5e-13 79.7 37 89.2
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 1.3e-12 77.4 59 59.3
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 2.4e-11 73.2 36 86.1
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 9.0e-11 71.2 39 71.8
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 7.6e-10 68.2 49 69.4
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 3.8e-09 65.9 44 72.7
HanXRQChr00c0496g0575171 Helianthus annuus HOM05D004473 ORTHO05D005652 4.9e-09 65.5 50 62.0
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 9.3e-08 61.2 55 60.0
Atru.chr7.156 Acer truncatum HOM05D004473 ORTHO05D005652 1.2e-07 60.8 35 77.1


User provided reference genes

Program Settings